{-| Module : Main.hs Description : Gargantext starter Copyright : (c) CNRS, 2017-Present License : AGPL + CECILL v3 Maintainer : team@gargantext.org Stability : experimental Portability : POSIX Main specifications to index a corpus with a term list -} {-# LANGUAGE DataKinds #-} {-# LANGUAGE DeriveGeneric #-} {-# LANGUAGE FlexibleInstances #-} {-# LANGUAGE NoImplicitPrelude #-} {-# LANGUAGE OverloadedStrings #-} {-# LANGUAGE StandaloneDeriving #-} {-# LANGUAGE TypeOperators #-} {-# LANGUAGE Strict #-} module Main where import Data.ByteString.Lazy (writeFile) import Data.Maybe (catMaybes) import Data.Text (pack) import qualified Data.Text as DT import Data.Tuple.Extra (both) import qualified Data.Vector as DV import qualified Data.Maybe as DMaybe import Control.Monad (zipWithM) import Control.Monad.IO.Class import Data.Map (Map) import qualified Data.IntMap as DIM import qualified Data.Map as DM import GHC.Generics import Data.Aeson import Data.Text (Text) import Data.List (cycle, concat, unwords) import Data.List.Split (chunksOf) import System.IO (hPutStr, hFlush, stderr) import System.Environment import Control.Concurrent.Async as CCA (mapConcurrently) import Control.Concurrent (getNumCapabilities, myThreadId, threadCapability) import Prelude ((>>)) import Gargantext.Prelude import Gargantext.Core import Gargantext.Core.Types import Gargantext.Text.Terms import Gargantext.Text.Context import Gargantext.Text.Terms.WithList import Gargantext.Text.Parsers.CSV (readCsv, csv_title, csv_abstract, csv_publication_year) import Gargantext.Text.List.CSV (csvGraphTermList) import Gargantext.Text.Terms (terms) import Gargantext.Text.Metrics.Count (coocOnContexts, Coocs) ------------------------------------------------------------------------ -- OUTPUT format data CoocByYear = CoocByYear { year :: Int , nbContexts :: NbContexts , coocurrences :: Map (Text, Text) Coocs } deriving (Show, Generic) data CoocByYears = CoocByYears { years :: [CoocByYear] } deriving (Show, Generic) type NbContexts = Int instance ToJSON CoocByYear instance ToJSON CoocByYears ------------------------------------------------------------------------ filterTermsAndCooc :: Patterns -> (Int, [Text]) -> IO CoocByYear -- (Int, (Map (Text, Text) Coocs)) filterTermsAndCooc patterns (year, ts) = do log "start" r <- coocOnContexts identity <$> mapM (\x -> {-log "work" >>-} terms' patterns x) ts log "stop" pure $ CoocByYear year (length ts) (DM.mapKeys (both DT.unwords) r) where log m = do tid <- myThreadId (p, _) <- threadCapability tid putStrLn . unwords $ ["filterTermsAndCooc:", m, show year, "on proc", show p] main :: IO () main = do [corpusFile, termListFile, outputFile] <- getArgs --corpus :: IO (DM.IntMap [[Text]]) corpus <- DM.fromListWith (<>) . DV.toList . DV.map (\n -> (csv_publication_year n, [(csv_title n) <> " " <> (csv_abstract n)])) . snd <$> readCsv corpusFile -- termListMap :: [Text] termList <- csvGraphTermList termListFile putStrLn $ show $ length termList let patterns = buildPatterns termList -- r <- mapConcurrentlyChunked (filterTermsAndCooc patterns) (DM.toList corpus) r <- mapConcurrently (filterTermsAndCooc patterns) (DM.toList corpus) writeFile outputFile $ encode (CoocByYears r) ------------------------------------------------------------------------ -- | Tools mapMP :: MonadIO m => (a -> m b) -> [a] -> m [b] mapMP f xs = do bs <- zipWithM g (cycle "-\\|/") xs liftIO $ hPutStr stderr "\rDone\n" pure bs where g c x = do liftIO $ hPutStr stderr ['\r',c] liftIO $ hFlush stderr f x -- | Optimi that need further developments (not used yet) mapConcurrentlyChunked :: (a -> IO b) -> [a] -> IO [b] mapConcurrentlyChunked f ts = do caps <- getNumCapabilities let n = 1 `max` (length ts `div` caps) concat <$> mapConcurrently (mapM f) (chunksOf n ts) --terms' :: Patterns -> Text -> Corpus [[Text]] terms' pats txt = pure $ concat $ extractTermsWithList pats txt -- | TODO Minimal Example --testCooc = do -- let patterns = buildPatterns testTermList -- mapM (\x -> {-log "work" >>-} terms' patterns x) $ catMaybes $ map (head . snd) testCorpus -- --mapConcurrently (filterTermsAndCooc patterns) testCorpus testCorpus :: [(Int, [Text])] testCorpus = [ (1998, [pack "The beees"]) , (1999, [ pack "The bees and the flowers" --, pack "The bees and the flowers" ]) ] testTermList :: TermList testTermList = [ ([pack "bee"], [[pack "bees"]]) , ([pack "flower"], [[pack "flowers"]]) ]