{-| Module : Gargantext.Database.Schema.Ngrams Description : Ngram connection to the Database Copyright : (c) CNRS, 2017-Present License : AGPL + CECILL v3 Maintainer : team@gargantext.org Stability : experimental Portability : POSIX Ngrams connection to the Database. -} {-# LANGUAGE Arrows #-} {-# LANGUAGE DeriveGeneric #-} {-# LANGUAGE FlexibleInstances #-} {-# LANGUAGE FunctionalDependencies #-} {-# LANGUAGE MultiParamTypeClasses #-} {-# LANGUAGE NoImplicitPrelude #-} {-# LANGUAGE OverloadedStrings #-} {-# LANGUAGE QuasiQuotes #-} {-# LANGUAGE RankNTypes #-} {-# LANGUAGE TemplateHaskell #-} module Gargantext.Database.Schema.Ngrams where import Control.Lens (makeLenses, view) import Data.ByteString.Internal (ByteString) import Data.Map (Map, fromList, lookup, fromListWith) import Data.Profunctor.Product.TH (makeAdaptorAndInstance) import Data.Set (Set) import Data.Text (Text, splitOn) import Database.PostgreSQL.Simple ((:.)(..)) import Database.PostgreSQL.Simple.FromRow (fromRow, field) import Database.PostgreSQL.Simple.SqlQQ (sql) import Database.PostgreSQL.Simple.ToField (toField) import Database.PostgreSQL.Simple.ToRow (toRow) import Database.PostgreSQL.Simple.Types (Values(..), QualifiedIdentifier(..)) --import Debug.Trace (trace) import GHC.Generics (Generic) import Gargantext.Core.Types -- (fromListTypeId, ListType, NodePoly(Node)) import Gargantext.Database.Config (nodeTypeId,userMaster) import Gargantext.Database.Root (getRoot) import Gargantext.Database.Types.Node (NodeType) import Gargantext.Database.Schema.Node (getListsWithParentId, getCorporaWithParentId) import Gargantext.Database.Utils (Cmd, runPGSQuery, runOpaQuery, formatPGSQuery) import Gargantext.Prelude import Opaleye import Prelude (Enum, Bounded, minBound, maxBound) import qualified Data.Set as DS import qualified Database.PostgreSQL.Simple as PGS --{- data NgramsPoly id terms n = NgramsDb { ngrams_id :: id , ngrams_terms :: terms , ngrams_n :: n } deriving (Show) --} type NgramsWrite = NgramsPoly (Maybe (Column PGInt4)) (Column PGText) (Column PGInt4) type NgramsRead = NgramsPoly (Column PGInt4) (Column PGText) (Column PGInt4) type NgramsReadNull = NgramsPoly (Column (Nullable PGInt4)) (Column (Nullable PGText)) (Column (Nullable PGInt4)) --{- type NgramsDb = NgramsPoly Int Text Int $(makeAdaptorAndInstance "pNgramsDb" ''NgramsPoly) -- $(makeLensesWith abbreviatedFields ''NgramsPoly) ngramsTable :: Table NgramsWrite NgramsRead ngramsTable = Table "ngrams" (pNgramsDb NgramsDb { ngrams_id = optional "id" , ngrams_terms = required "terms" , ngrams_n = required "n" } ) --{- queryNgramsTable :: Query NgramsRead queryNgramsTable = queryTable ngramsTable dbGetNgramsDb :: Cmd err [NgramsDb] dbGetNgramsDb = runOpaQuery queryNgramsTable --} -- | Main Ngrams Types -- | Typed Ngrams -- Typed Ngrams localize the context of the ngrams -- ngrams in source field of document has Sources Type -- ngrams in authors field of document has Authors Type -- ngrams in text (title or abstract) of documents has Terms Type data NgramsType = Authors | Institutes | Sources | NgramsTerms deriving (Eq, Show, Ord, Enum, Bounded) ngramsTypeId :: NgramsType -> Int ngramsTypeId Authors = 1 ngramsTypeId Institutes = 2 ngramsTypeId Sources = 3 ngramsTypeId NgramsTerms = 4 fromNgramsTypeId :: Int -> Maybe NgramsType fromNgramsTypeId id = lookup id $ fromList [(ngramsTypeId nt,nt) | nt <- [minBound .. maxBound] :: [NgramsType]] type NgramsTerms = Text type NgramsId = Int type Size = Int ------------------------------------------------------------------------ -- | TODO put it in Gargantext.Text.Ngrams data Ngrams = Ngrams { _ngramsTerms :: Text , _ngramsSize :: Int } deriving (Generic, Show, Eq, Ord) makeLenses ''Ngrams instance PGS.ToRow Ngrams where toRow (Ngrams t s) = [toField t, toField s] text2ngrams :: Text -> Ngrams text2ngrams txt = Ngrams txt $ length $ splitOn " " txt ------------------------------------------------------------------------- -- | TODO put it in Gargantext.Text.Ngrams -- Named entity are typed ngrams of Terms Ngrams data NgramsT a = NgramsT { _ngramsType :: NgramsType , _ngramsT :: a } deriving (Generic, Show, Eq, Ord) makeLenses ''NgramsT ----------------------------------------------------------------------- data NgramsIndexed = NgramsIndexed { _ngrams :: Ngrams , _ngramsId :: NgramsId } deriving (Show, Generic, Eq, Ord) makeLenses ''NgramsIndexed ------------------------------------------------------------------------ data NgramIds = NgramIds { ngramId :: Int , ngramTerms :: Text } deriving (Show, Generic, Eq, Ord) instance PGS.FromRow NgramIds where fromRow = NgramIds <$> field <*> field ---------------------- indexNgramsT :: Map NgramsTerms NgramsId -> NgramsT Ngrams -> NgramsT NgramsIndexed indexNgramsT m ngrId = indexNgramsTWith f ngrId where f n = maybe (panic "indexNgramsT: should not happen") identity (lookup n m) indexNgramsTWith :: (NgramsTerms -> NgramsId) -> NgramsT Ngrams-> NgramsT NgramsIndexed indexNgramsTWith f (NgramsT t n) = NgramsT t (NgramsIndexed n ((f . _ngramsTerms) n)) insertNgrams :: [Ngrams] -> Cmd err (Map NgramsTerms NgramsId) insertNgrams ns = fromList <$> map (\(NgramIds i t) -> (t, i)) <$> (insertNgrams' ns) insertNgrams' :: [Ngrams] -> Cmd err [NgramIds] insertNgrams' ns = runPGSQuery queryInsertNgrams (PGS.Only $ Values fields ns) where fields = map (\t -> QualifiedIdentifier Nothing t) ["text", "int4"] insertNgrams_Debug :: [(NgramsTerms, Size)] -> Cmd err ByteString insertNgrams_Debug ns = formatPGSQuery queryInsertNgrams (PGS.Only $ Values fields ns) where fields = map (\t -> QualifiedIdentifier Nothing t) ["text", "int4"] ---------------------- queryInsertNgrams :: PGS.Query queryInsertNgrams = [sql| WITH input_rows(terms,n) AS (?) , ins AS ( INSERT INTO ngrams (terms,n) SELECT * FROM input_rows ON CONFLICT (terms) DO NOTHING -- unique index created here RETURNING id,terms ) SELECT id, terms FROM ins UNION ALL SELECT c.id, terms FROM input_rows JOIN ngrams c USING (terms); -- columns of unique index |] -- | Ngrams Table -- TODO: the way we are getting main Master Corpus and List ID is not clean -- TODO: if ids are not present -> create -- TODO: Global Env State Monad to keep in memory the ids without retrieving it each time getNgramsTableDb :: NodeType -> NgramsType -> NgramsTableParamUser -> Limit -> Offset -> Cmd err ([NgramsTableData], MapToParent, MapToChildren) getNgramsTableDb nt ngrt ntp@(NgramsTableParam listIdUser _) limit_ offset_ = do maybeRoot <- head <$> getRoot userMaster let path = "Garg.Db.Ngrams.getTableNgrams: " let masterRootId = maybe (panic $ path <> "no userMaster Tree") (view node_id) maybeRoot -- let errMess = panic "Error" corpusMasterId <- maybe (panic "error master corpus") (view node_id) <$> head <$> getCorporaWithParentId masterRootId listMasterId <- maybe (panic "error master list") (view node_id) <$> head <$> getListsWithParentId corpusMasterId ngramsTableData <- getNgramsTableData nt ngrt ntp (NgramsTableParam listMasterId corpusMasterId) limit_ offset_ (mapToParent,mapToChildren) <- getNgramsGroup listIdUser listMasterId pure (ngramsTableData, mapToParent,mapToChildren) data NgramsTableParam = NgramsTableParam { _nt_listId :: NodeId , _nt_corpusId :: NodeId } type NgramsTableParamUser = NgramsTableParam type NgramsTableParamMaster = NgramsTableParam data NgramsTableData = NgramsTableData { _ntd_ngrams :: Text , _ntd_n :: Int , _ntd_listType :: Maybe ListType , _ntd_weight :: Double } deriving (Show) getNgramsTableData :: NodeType -> NgramsType -> NgramsTableParamUser -> NgramsTableParamMaster -> Limit -> Offset -> Cmd err [NgramsTableData] getNgramsTableData nodeT ngrmT (NgramsTableParam ul uc) (NgramsTableParam ml mc) limit_ offset_ = -- trace ("Ngrams table params" <> show params) <$> map (\(t,n,nt,w) -> NgramsTableData t n (fromListTypeId nt) w) <$> runPGSQuery querySelectTableNgrams params where nodeTId = nodeTypeId nodeT ngrmTId = ngramsTypeId ngrmT params = (ul,uc,nodeTId,ngrmTId,ml,mc,nodeTId,ngrmTId,uc) :. (limit_, offset_) querySelectTableNgrams :: PGS.Query querySelectTableNgrams = [sql| WITH tableUser AS ( SELECT ngs.terms, ngs.n, list.list_type, corp.weight FROM ngrams ngs JOIN nodes_ngrams list ON list.ngrams_id = ngs.id JOIN nodes_ngrams corp ON corp.ngrams_id = ngs.id JOIN nodes_nodes nn ON nn.node2_id = corp.node_id JOIN nodes n ON n.id = corp.node_id WHERE list.node_id = ? -- User listId AND nn.node1_id = ? -- User CorpusId or AnnuaireId AND n.typename = ? -- both type of childs (Documents or Contacts) AND corp.ngrams_type = ? -- both type of ngrams (Authors or Terms or...) ) , tableMaster AS ( SELECT ngs.terms, ngs.n, list.list_type, corp.weight FROM ngrams ngs JOIN nodes_ngrams list ON list.ngrams_id = ngs.id JOIN nodes_ngrams corp ON corp.ngrams_id = ngs.id JOIN nodes n ON n.id = corp.node_id JOIN nodes_nodes nn ON nn.node2_id = n.id WHERE list.node_id = ? -- Master listId AND n.parent_id = ? -- Master CorpusId or AnnuaireId AND n.typename = ? -- Master childs (Documents or Contacts) AND corp.ngrams_type = ? -- both type of ngrams (Authors or Terms?) AND nn.node1_id = ? -- User CorpusId or AnnuaireId ) SELECT COALESCE(tu.terms,tm.terms) AS terms , COALESCE(tu.n,tm.n) AS n , COALESCE(tu.list_type,tm.list_type) AS ngrams_type , SUM(COALESCE(tu.weight,tm.weight)) AS weight FROM tableUser tu RIGHT JOIN tableMaster tm ON tu.terms = tm.terms GROUP BY tu.terms,tm.terms,tu.n,tm.n,tu.list_type,tm.list_type ORDER BY 1,2 LIMIT ? OFFSET ?; |] type ListIdUser = NodeId type ListIdMaster = NodeId type MapToChildren = Map Text (Set Text) type MapToParent = Map Text Text getNgramsGroup :: ListIdUser -> ListIdMaster -> Cmd err (MapToParent, MapToChildren) getNgramsGroup lu lm = do groups <- runPGSQuery querySelectNgramsGroup (lu,lm) let mapChildren = fromListWith (<>) $ map (\(a,b) -> (a, DS.singleton b)) groups let mapParent = fromListWith (<>) $ map (\(a,b) -> (b, a)) groups pure (mapParent, mapChildren) querySelectNgramsGroup :: PGS.Query querySelectNgramsGroup = [sql| WITH groupUser AS ( SELECT n1.terms AS t1, n2.terms AS t2 FROM nodes_ngrams_ngrams nnn JOIN ngrams n1 ON n1.id = nnn.ngram1_id JOIN ngrams n2 ON n2.id = nnn.ngram2_id WHERE nnn.node_id = ? -- User listId ), groupMaster AS ( SELECT n1.terms AS t1, n2.terms AS t2 FROM nodes_ngrams_ngrams nnn JOIN ngrams n1 ON n1.id = nnn.ngram1_id JOIN ngrams n2 ON n2.id = nnn.ngram2_id WHERE nnn.node_id = ? -- Master listId ) SELECT COALESCE(gu.t1,gm.t1) AS ngram1_id , COALESCE(gu.t2,gm.t2) AS ngram2_id FROM groupUser gu LEFT JOIN groupMaster gm ON gu.t1 = gm.t1 |]