{-| Module : Gargantext.Database.Schema.NgramsPostag Description : Ngram connection to the Database Copyright : (c) CNRS, 2017-Present License : AGPL + CECILL v3 Maintainer : team@gargantext.org Stability : experimental Portability : POSIX Ngrams connection to the Database. -} {-# OPTIONS_GHC -fno-warn-orphans #-} {-# LANGUAGE Arrows #-} {-# LANGUAGE FunctionalDependencies #-} {-# LANGUAGE QuasiQuotes #-} {-# LANGUAGE TemplateHaskell #-} module Gargantext.Database.Schema.Ngrams where import Codec.Serialise (Serialise()) import Control.Lens (over) import Control.Monad (mzero) import Data.Aeson import Data.Aeson.Types (toJSONKeyText) import Data.HashMap.Strict (HashMap) import Data.Hashable (Hashable) import Data.Map.Strict (fromList, lookup) import Data.Maybe (fromMaybe) import Data.Text (Text, splitOn, pack, strip) import Database.PostgreSQL.Simple.FromField (returnError, ResultError(..)) import Gargantext.Core (HasDBid(..)) import Gargantext.Core.Types (TODO(..), Typed(..)) import Gargantext.Database.Schema.Prelude hiding (over) import Gargantext.Database.Types import Gargantext.Prelude import Servant (FromHttpApiData(..), Proxy(..), ToHttpApiData(..)) import Test.QuickCheck (elements) import Text.Read (read) import qualified Data.ByteString.Char8 as B import qualified Data.HashMap.Strict as HashMap import qualified Database.PostgreSQL.Simple as PGS type NgramsId = Int type Size = Int data NgramsPoly id terms n = NgramsDB { _ngrams_id :: !id , _ngrams_terms :: !terms , _ngrams_n :: !n } deriving (Show) type NgramsWrite = NgramsPoly (Maybe (Field SqlInt4)) (Field SqlText) (Field SqlInt4) type NgramsRead = NgramsPoly (Field SqlInt4) (Field SqlText) (Field SqlInt4) type NgramsReadNull = NgramsPoly (FieldNullable SqlInt4) (FieldNullable SqlText) (FieldNullable SqlInt4) type NgramsDB = NgramsPoly Int Text Int $(makeAdaptorAndInstance "pNgramsDb" ''NgramsPoly) makeLenses ''NgramsPoly ngramsTable :: Table NgramsWrite NgramsRead ngramsTable = Table "ngrams" (pNgramsDb NgramsDB { _ngrams_id = optionalTableField "id" , _ngrams_terms = requiredTableField "terms" , _ngrams_n = requiredTableField "n" } ) -- | Main Ngrams Types -- | Typed Ngrams -- Typed Ngrams localize the context of the ngrams -- ngrams in source field of document has Sources Type -- ngrams in authors field of document has Authors Type -- ngrams in text fields of documents has Terms Type (i.e. either title or abstract) data NgramsType = Authors | Institutes | Sources | NgramsTerms deriving (Eq, Show, Read, Ord, Enum, Bounded, Generic) instance Serialise NgramsType instance FromJSON NgramsType where parseJSON (String "Authors") = pure Authors parseJSON (String "Institutes") = pure Institutes parseJSON (String "Sources") = pure Sources parseJSON (String "Terms") = pure NgramsTerms parseJSON (String "NgramsTerms") = pure NgramsTerms parseJSON _ = mzero instance FromJSONKey NgramsType where fromJSONKey = FromJSONKeyTextParser (parseJSON . String) instance ToJSON NgramsType where toJSON Authors = String "Authors" toJSON Institutes = String "Institutes" toJSON Sources = String "Sources" toJSON NgramsTerms = String "Terms" instance ToJSONKey NgramsType where toJSONKey = toJSONKeyText (pack . show) instance FromHttpApiData NgramsType where parseUrlPiece n = pure $ (read . cs) n instance ToHttpApiData NgramsType where toUrlPiece = pack . show instance ToParamSchema NgramsType where toParamSchema _ = toParamSchema (Proxy :: Proxy TODO) instance Arbitrary NgramsType where arbitrary = elements [ minBound .. maxBound ] -- map NgramsType to its assigned id instance FromField NgramsType where fromField fld mdata = case B.unpack `fmap` mdata of Nothing -> returnError UnexpectedNull fld "" Just dat -> do n <- fromField fld mdata if (n :: Int) > 0 then case fromNgramsTypeId (NgramsTypeId n) of Nothing -> returnError ConversionFailed fld dat Just nt -> pure nt else returnError ConversionFailed fld dat instance ToField NgramsType where toField nt = toField $ ngramsTypeId nt ngramsTypes :: [NgramsType] ngramsTypes = [minBound..] instance ToSchema NgramsType {- where declareNamedSchema = genericDeclareNamedSchema (unPrefixSwagger "_nre_") --} newtype NgramsTypeId = NgramsTypeId Int deriving (Eq, Show, Ord, Num) instance ToField NgramsTypeId where toField (NgramsTypeId n) = toField n instance FromField NgramsTypeId where fromField fld mdata = do n <- fromField fld mdata if (n :: Int) > 0 then return $ NgramsTypeId n else mzero instance DefaultFromField (Nullable SqlInt4) NgramsTypeId where defaultFromField = fromPGSFromField pgNgramsType :: NgramsType -> Field SqlInt4 pgNgramsType = pgNgramsTypeId . ngramsTypeId pgNgramsTypeId :: NgramsTypeId -> Field SqlInt4 pgNgramsTypeId (NgramsTypeId n) = sqlInt4 n ngramsTypeId :: NgramsType -> NgramsTypeId ngramsTypeId Authors = 1 ngramsTypeId Institutes = 2 ngramsTypeId Sources = 3 ngramsTypeId NgramsTerms = 4 fromNgramsTypeId :: NgramsTypeId -> Maybe NgramsType fromNgramsTypeId id = lookup id $ fromList [ (ngramsTypeId nt,nt) | nt <- [minBound .. maxBound] :: [NgramsType] ] unNgramsTypeId :: NgramsTypeId -> Int unNgramsTypeId (NgramsTypeId i) = i toNgramsTypeId :: Int -> NgramsTypeId toNgramsTypeId i = NgramsTypeId i instance HasDBid NgramsType where toDBid = unNgramsTypeId . ngramsTypeId fromDBid = fromMaybe (panic "NgramsType id not indexed") . fromNgramsTypeId . toNgramsTypeId ------------------------------------------------------------------------ ------------------------------------------------------------------------ -- | TODO put it in Gargantext.Core.Text.Ngrams data Ngrams = UnsafeNgrams { _ngramsTerms :: Text , _ngramsSize :: Int } deriving (Generic, Show, Eq, Ord) instance Hashable Ngrams makeLenses ''Ngrams instance PGS.ToRow Ngrams where toRow (UnsafeNgrams t s) = [toField t, toField s] instance FromField Ngrams where fromField fld mdata = do x <- fromField fld mdata pure $ text2ngrams x instance PGS.ToRow Text where toRow t = [toField t] text2ngrams :: Text -> Ngrams text2ngrams txt = UnsafeNgrams txt' $ length $ splitOn " " txt' where txt' = strip txt ------------------------------------------------------------------------ ------------------------------------------------------------------------- -- | TODO put it in Gargantext.Core.Text.Ngrams -- Named entity are typed ngrams of Terms Ngrams data NgramsT a = NgramsT { _ngramsType :: NgramsType , _ngramsT :: a } deriving (Generic, Show, Eq, Ord) makeLenses ''NgramsT instance Functor NgramsT where fmap = over ngramsT ----------------------------------------------------------------------- withMap :: HashMap Text NgramsId -> Text -> NgramsId withMap m n = maybe (panic $ "[G.D.S.Ngrams.withMap] Should not happen" <> (cs $ show n)) identity (HashMap.lookup n m) indexNgramsT :: HashMap Text NgramsId -> NgramsT Ngrams -> NgramsT (Indexed Int Ngrams) indexNgramsT = fmap . indexNgramsWith . withMap -- | TODO replace NgramsT whith Typed NgramsType Ngrams indexTypedNgrams :: HashMap Text NgramsId -> Typed NgramsType Ngrams -> Typed NgramsType (Indexed Int Ngrams) indexTypedNgrams = fmap . indexNgramsWith . withMap indexNgrams :: HashMap Text NgramsId -> Ngrams -> Indexed Int Ngrams indexNgrams = indexNgramsWith . withMap indexNgramsWith :: (Text -> NgramsId) -> Ngrams -> Indexed Int Ngrams indexNgramsWith f n = Indexed (f $ _ngramsTerms n) n