{-| Module : Gargantext.Database.Flow Description : Database Flow Copyright : (c) CNRS, 2017-Present License : AGPL + CECILL v3 Maintainer : team@gargantext.org Stability : experimental Portability : POSIX -- TODO-ACCESS: -- check userId CanFillUserCorpus userCorpusId -- check masterUserId CanFillMasterCorpus masterCorpusId -- TODO-ACCESS: check uId CanInsertDoc pId && checkDocType nodeType -- TODO-EVENTS: InsertedNodes -} {-# LANGUAGE ConstraintKinds #-} {-# LANGUAGE DeriveGeneric #-} {-# LANGUAGE NoImplicitPrelude #-} {-# LANGUAGE OverloadedStrings #-} {-# LANGUAGE RankNTypes #-} {-# LANGUAGE FlexibleContexts #-} module Gargantext.Database.Flow -- (flowDatabase, ngrams2list) where --import Debug.Trace (trace) import Control.Lens ((^.), view, Lens', _Just) import Control.Monad (mapM_) import Control.Monad.IO.Class (liftIO) import Data.List (concat) import Data.Map (Map, lookup, toList) import Data.Maybe (Maybe(..), catMaybes) import Data.Monoid import Data.Text (Text, splitOn, intercalate) import GHC.Show (Show) import Gargantext.API.Ngrams (HasRepoVar) import Gargantext.API.Ngrams (NgramsElement(..), putListNgrams, RepoCmdM) import Gargantext.Core (Lang(..)) import Gargantext.Core.Types (NodePoly(..), Terms(..)) import Gargantext.Core.Types.Individu (Username) import Gargantext.Core.Types.Main import Gargantext.Database.Config (userMaster, corpusMasterName) import Gargantext.Database.Flow.Utils (insertDocNgrams) import Gargantext.Database.Node.Contact -- (HyperdataContact(..), ContactWho(..)) import Gargantext.Database.Node.Document.Insert -- (insertDocuments, ReturnId(..), addUniqIdsDoc, addUniqIdsContact, ToDbData(..)) import Gargantext.Database.Root (getRoot) import Gargantext.Database.Schema.Ngrams -- (insertNgrams, Ngrams(..), NgramsIndexed(..), indexNgrams, NgramsType(..), text2ngrams, ngramsTypeId) import Gargantext.Database.Schema.Node -- (mkRoot, mkCorpus, getOrMkList, mkGraph, mkDashboard, mkAnnuaire, getCorporaWithParentId, HasNodeError, NodeError(..), nodeError) import Gargantext.Database.Schema.User (getUser, UserLight(..)) import Gargantext.Database.TextSearch (searchInDatabase) import Gargantext.Database.Types.Node -- (HyperdataDocument(..), NodeType(..), NodeId, UserId, ListId, CorpusId, RootId, MasterCorpusId, MasterUserId) import Gargantext.Database.Utils (Cmd, CmdM) import Gargantext.Ext.IMT (toSchoolName) import Gargantext.Ext.IMTUser (deserialiseImtUsersFromFile) import Gargantext.Prelude import Gargantext.Text.List (buildNgramsLists,StopSize(..)) import Gargantext.Text.Parsers (parseDocs, FileFormat) import Gargantext.Text.Terms (TermType(..), tt_lang) import Gargantext.Text.Terms (extractTerms) import Gargantext.Text.Terms.Mono.Stem.En (stemIt) import Servant (ServantErr) import System.FilePath (FilePath) --import qualified Data.List as List import qualified Data.Map as Map import qualified Data.Text as Text import qualified Gargantext.Database.Node.Document.Add as Doc (add) import qualified Gargantext.Text.Parsers.GrandDebat as GD type FlowCmdM env err m = ( CmdM env err m , RepoCmdM env err m , HasNodeError err , HasRepoVar env ) type FlowCorpus a = ( AddUniqId a , UniqId a , InsertDb a , ExtractNgramsT a ) ------------------------------------------------------------------------ flowAnnuaire :: FlowCmdM env ServantErr m => Username -> CorpusName -> (TermType Lang) -> FilePath -> m AnnuaireId flowAnnuaire u n l filePath = do docs <- liftIO $ (( splitEvery 500 <$> deserialiseImtUsersFromFile filePath) :: IO [[HyperdataContact]]) flow (Nothing :: Maybe HyperdataAnnuaire) u n l docs flowCorpusDebat :: FlowCmdM env ServantErr m => Username -> CorpusName -> Limit -> FilePath -> m CorpusId flowCorpusDebat u n l fp = do docs <- liftIO ( splitEvery 500 <$> take l <$> GD.readFile fp :: IO [[GD.GrandDebatReference ]] ) flowCorpus u n (Multi FR) (map (map toHyperdataDocument) docs) flowCorpusFile :: FlowCmdM env ServantErr m => Username -> CorpusName -> Limit -- Limit the number of docs (for dev purpose) -> TermType Lang -> FileFormat -> FilePath -> m CorpusId flowCorpusFile u n l la ff fp = do docs <- liftIO ( splitEvery 500 <$> take l <$> parseDocs ff fp ) flowCorpus u n la (map (map toHyperdataDocument) docs) -- TODO query with complex query flowCorpusSearchInDatabase :: FlowCmdM env ServantErr m => Username -> Lang -> Text -> m CorpusId flowCorpusSearchInDatabase u la q = do (_masterUserId, _masterRootId, cId) <- getOrMkRootWithCorpus userMaster "" (Nothing :: Maybe HyperdataCorpus) ids <- map fst <$> searchInDatabase cId (stemIt q) flowCorpusUser la u q (Nothing :: Maybe HyperdataCorpus) ids ------------------------------------------------------------------------ flow :: (FlowCmdM env ServantErr m, FlowCorpus a, MkCorpus c) => Maybe c -> Username -> CorpusName -> TermType Lang -> [[a]] -> m CorpusId flow c u cn la docs = do ids <- mapM (insertMasterDocs c la ) docs flowCorpusUser (la ^. tt_lang) u cn c (concat ids) flowCorpus :: (FlowCmdM env ServantErr m, FlowCorpus a) => Username -> CorpusName -> TermType Lang -> [[a]] -> m CorpusId flowCorpus = flow (Nothing :: Maybe HyperdataCorpus) flowCorpusUser :: (FlowCmdM env ServantErr m, MkCorpus c) => Lang -> Username -> CorpusName -> Maybe c -> [NodeId] -> m CorpusId flowCorpusUser l userName corpusName ctype ids = do -- User Flow (userId, _rootId, userCorpusId) <- getOrMkRootWithCorpus userName corpusName ctype -- TODO: check if present already, ignore _ <- Doc.add userCorpusId ids -- User List Flow --{- (_masterUserId, _masterRootId, masterCorpusId) <- getOrMkRootWithCorpus userMaster "" ctype ngs <- buildNgramsLists l 2 3 (StopSize 3) userCorpusId masterCorpusId userListId <- flowList userId userCorpusId ngs printDebug "userListId" userListId -- User Graph Flow _ <- mkGraph userCorpusId userId --} -- User Dashboard Flow _ <- mkDashboard userCorpusId userId -- Annuaire Flow -- _ <- mkAnnuaire rootUserId userId pure userCorpusId insertMasterDocs :: ( FlowCmdM env ServantErr m , FlowCorpus a , MkCorpus c ) => Maybe c -> TermType Lang -> [a] -> m [DocId] insertMasterDocs c lang hs = do (masterUserId, _, masterCorpusId) <- getOrMkRootWithCorpus userMaster corpusMasterName c -- TODO Type NodeDocumentUnicised let hs' = map addUniqId hs ids <- insertDb masterUserId masterCorpusId hs' let documentsWithId = mergeData (toInserted ids) (Map.fromList $ map viewUniqId' hs') maps <- mapNodeIdNgrams <$> documentIdWithNgrams (extractNgramsT lang) documentsWithId terms2id <- insertNgrams $ Map.keys maps let indexedNgrams = Map.mapKeys (indexNgrams terms2id) maps lId <- getOrMkList masterCorpusId masterUserId _ <- insertDocNgrams lId indexedNgrams pure $ map reId ids type CorpusName = Text getOrMkRootWithCorpus :: (HasNodeError err, MkCorpus a) => Username -> CorpusName -> Maybe a -> Cmd err (UserId, RootId, CorpusId) getOrMkRootWithCorpus username cName c = do maybeUserId <- getUser username userId <- case maybeUserId of Nothing -> nodeError NoUserFound Just user -> pure $ userLight_id user rootId' <- map _node_id <$> getRoot username rootId'' <- case rootId' of [] -> mkRoot username userId n -> case length n >= 2 of True -> nodeError ManyNodeUsers False -> pure rootId' rootId <- maybe (nodeError NoRootFound) pure (head rootId'') corpusId'' <- if username == userMaster then do ns <- getCorporaWithParentId rootId pure $ map _node_id ns else pure [] corpusId' <- if corpusId'' /= [] then pure corpusId'' else mk (Just cName) c rootId userId corpusId <- maybe (nodeError NoCorpusFound) pure (head corpusId') pure (userId, rootId, corpusId) ------------------------------------------------------------------------ class UniqId a where uniqId :: Lens' a (Maybe HashId) instance UniqId HyperdataDocument where uniqId = hyperdataDocument_uniqId instance UniqId HyperdataContact where uniqId = hc_uniqId viewUniqId' :: UniqId a => a -> (HashId, a) viewUniqId' d = maybe err (\h -> (h,d)) (view uniqId d) where err = panic "[ERROR] Database.Flow.toInsert" toInserted :: [ReturnId] -> Map HashId ReturnId toInserted = Map.fromList . map (\r -> (reUniqId r, r) ) . filter (\r -> reInserted r == True) data DocumentWithId a = DocumentWithId { documentId :: !NodeId , documentData :: !a } deriving (Show) mergeData :: Map HashId ReturnId -> Map HashId a -> [DocumentWithId a] mergeData rs = catMaybes . map toDocumentWithId . Map.toList where toDocumentWithId (hash,hpd) = DocumentWithId <$> fmap reId (lookup hash rs) <*> Just hpd ------------------------------------------------------------------------ data DocumentIdWithNgrams a = DocumentIdWithNgrams { documentWithId :: !(DocumentWithId a) , document_ngrams :: !(Map Ngrams (Map NgramsType Int)) } deriving (Show) -- TODO extractNgrams according to Type of Data class ExtractNgramsT h where extractNgramsT :: TermType Lang -> h -> Cmd err (Map Ngrams (Map NgramsType Int)) instance ExtractNgramsT HyperdataContact where extractNgramsT l hc = filterNgramsT 255 <$> extract l hc where extract :: TermType Lang -> HyperdataContact -> Cmd err (Map Ngrams (Map NgramsType Int)) extract _l hc' = do let authors = map text2ngrams $ maybe ["Nothing"] (\a -> [a]) $ view (hc_who . _Just . cw_lastName) hc' pure $ Map.fromList $ [(a', Map.singleton Authors 1) | a' <- authors ] instance ExtractNgramsT HyperdataDocument where extractNgramsT = extractNgramsT' extractNgramsT' :: TermType Lang -> HyperdataDocument -> Cmd err (Map Ngrams (Map NgramsType Int)) extractNgramsT' lang hd = filterNgramsT 255 <$> extractNgramsT'' lang hd where extractNgramsT'' :: TermType Lang -> HyperdataDocument -> Cmd err (Map Ngrams (Map NgramsType Int)) extractNgramsT'' lang' doc = do let source = text2ngrams $ maybe "Nothing" identity $ _hyperdataDocument_source doc institutes = map text2ngrams $ maybe ["Nothing"] (map toSchoolName . (splitOn ", ")) $ _hyperdataDocument_institutes doc authors = map text2ngrams $ maybe ["Nothing"] (splitOn ", ") $ _hyperdataDocument_authors doc leText = catMaybes [ _hyperdataDocument_title doc , _hyperdataDocument_abstract doc ] terms' <- map text2ngrams <$> map (intercalate " " . _terms_label) <$> concat <$> liftIO (extractTerms lang' leText) pure $ Map.fromList $ [(source, Map.singleton Sources 1)] <> [(i', Map.singleton Institutes 1) | i' <- institutes ] <> [(a', Map.singleton Authors 1) | a' <- authors ] <> [(t', Map.singleton NgramsTerms 1) | t' <- terms' ] filterNgramsT :: Int -> Map Ngrams (Map NgramsType Int) -> Map Ngrams (Map NgramsType Int) filterNgramsT s ms = Map.fromList $ map (\a -> filter' s a) $ Map.toList ms where filter' s' (ng@(Ngrams t n),y) = case (Text.length t) < s' of True -> (ng,y) False -> (Ngrams (Text.take s' t) n , y) documentIdWithNgrams :: HasNodeError err => (a -> Cmd err (Map Ngrams (Map NgramsType Int))) -> [DocumentWithId a] -> Cmd err [DocumentIdWithNgrams a] documentIdWithNgrams f = mapM toDocumentIdWithNgrams where toDocumentIdWithNgrams d = do e <- f $ documentData d pure $ DocumentIdWithNgrams d e -- FLOW LIST -- | TODO check optimization mapNodeIdNgrams :: [DocumentIdWithNgrams a] -> Map Ngrams (Map NgramsType (Map NodeId Int)) mapNodeIdNgrams = Map.unionsWith (Map.unionWith (Map.unionWith (+))) . fmap f where f :: DocumentIdWithNgrams a -> Map Ngrams (Map NgramsType (Map NodeId Int)) f d = fmap (fmap (Map.singleton nId)) $ document_ngrams d where nId = documentId $ documentWithId d ------------------------------------------------------------------------ listInsert :: FlowCmdM env err m => ListId -> Map NgramsType [NgramsElement] -> m () listInsert lId ngs = mapM_ (\(typeList, ngElmts) -> putListNgrams lId typeList ngElmts ) $ toList ngs flowList :: FlowCmdM env err m => UserId -> CorpusId -> Map NgramsType [NgramsElement] -> m ListId flowList uId cId ngs = do lId <- getOrMkList cId uId printDebug "listId flowList" lId listInsert lId ngs --trace (show $ List.filter (\n -> _ne_ngrams n == "versatile") $ List.concat $ Map.elems ngs) $ listInsert lId ngs pure lId