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gargantext.git
2 years ago[STASH] back to old work
Alexandre Delanoë [Wed, 12 Oct 2022 11:35:39 +0000 (13:35 +0200)]
[STASH] back to old work

2 years ago[CLEAN] Code
Alexandre Delanoë [Wed, 12 Oct 2022 07:04:46 +0000 (09:04 +0200)]
[CLEAN] Code

2 years ago[FEAT] Graph Multipartite connected, need to change the node shape in Graph and tests
Alexandre Delanoë [Tue, 11 Oct 2022 14:38:13 +0000 (16:38 +0200)]
[FEAT] Graph Multipartite connected, need to change the node shape in Graph and tests

2 years ago[REBASE]
Alexandre Delanoë [Mon, 10 Oct 2022 09:35:21 +0000 (11:35 +0200)]
[REBASE]

2 years agoMerge remote-tracking branch 'origin/flexible-job-queue' into dev
Alexandre Delanoë [Tue, 18 Oct 2022 06:29:46 +0000 (08:29 +0200)]
Merge remote-tracking branch 'origin/flexible-job-queue' into dev

2 years ago[MERGE]
Alexandre Delanoë [Tue, 18 Oct 2022 06:29:32 +0000 (08:29 +0200)]
[MERGE]

2 years agointroduce and use a flexible job queue system
Alp Mestanogullari [Mon, 17 Oct 2022 19:42:20 +0000 (21:42 +0200)]
introduce and use a flexible job queue system

2 years ago[gargantext.ini] add BACKEND_NAME
Przemek Kaminski [Mon, 17 Oct 2022 16:21:59 +0000 (18:21 +0200)]
[gargantext.ini] add BACKEND_NAME

2 years ago[FEAT] Giving the instance Name to the user
Alexandre Delanoë [Mon, 10 Oct 2022 13:46:31 +0000 (15:46 +0200)]
[FEAT] Giving the instance Name to the user

2 years ago[VERSION] +1 to 0.0.6.7.1
Alexandre Delanoë [Mon, 10 Oct 2022 09:33:44 +0000 (11:33 +0200)]
[VERSION] +1 to 0.0.6.7.1

2 years ago[OPTIM] Ngrams Table query
Alexandre Delanoë [Mon, 10 Oct 2022 09:31:13 +0000 (11:31 +0200)]
[OPTIM] Ngrams Table query

2 years ago[ngrams] some attempt to fix query with sample (contexts)
Przemek Kaminski [Mon, 10 Oct 2022 08:40:38 +0000 (10:40 +0200)]
[ngrams] some attempt to fix query with sample (contexts)

2 years ago[WIP] First specification for #145 issue
Alexandre Delanoë [Fri, 7 Oct 2022 13:05:25 +0000 (15:05 +0200)]
[WIP] First specification for #145 issue

2 years ago[VERSION] +1 to 0.0.6.7
Alexandre Delanoë [Fri, 7 Oct 2022 12:47:36 +0000 (14:47 +0200)]
[VERSION] +1 to 0.0.6.7

2 years ago[FIX] Nodes with one edge only are removed now
Alexandre Delanoë [Fri, 7 Oct 2022 12:46:36 +0000 (14:46 +0200)]
[FIX] Nodes with one edge only are removed now

2 years ago[FIX] pubmed threaddelay
Alexandre Delanoë [Fri, 7 Oct 2022 08:26:08 +0000 (10:26 +0200)]
[FIX] pubmed threaddelay

2 years ago[WIP] specification for optimization
Alexandre Delanoë [Fri, 7 Oct 2022 07:39:46 +0000 (09:39 +0200)]
[WIP] specification for optimization

2 years ago[DOC] Changelog
Alexandre Delanoë [Thu, 6 Oct 2022 07:50:13 +0000 (09:50 +0200)]
[DOC] Changelog

2 years ago[VERSION] +1 to 0.0.6.6
Alexandre Delanoë [Thu, 6 Oct 2022 07:22:49 +0000 (09:22 +0200)]
[VERSION] +1 to 0.0.6.6

2 years ago[FEAT] Enabling confluence in backend
Alexandre Delanoë [Thu, 6 Oct 2022 07:17:21 +0000 (09:17 +0200)]
[FEAT] Enabling confluence in backend

2 years ago[DOC] With issues
Alexandre Delanoë [Tue, 4 Oct 2022 11:43:46 +0000 (13:43 +0200)]
[DOC] With issues

2 years ago[DOC] Changelog
Alexandre Delanoë [Mon, 3 Oct 2022 15:47:25 +0000 (17:47 +0200)]
[DOC] Changelog

2 years agoDoc
Alexandre Delanoë [Mon, 3 Oct 2022 07:43:15 +0000 (09:43 +0200)]
Doc

2 years ago[ADM] maintenance page
Alexandre Delanoë [Sat, 1 Oct 2022 05:14:02 +0000 (07:14 +0200)]
[ADM] maintenance page

2 years ago[DOC] Changelog
Alexandre Delanoë [Fri, 30 Sep 2022 13:30:12 +0000 (15:30 +0200)]
[DOC] Changelog

2 years ago[MERGE] dev-phylo
Alexandre Delanoë [Fri, 30 Sep 2022 13:29:29 +0000 (15:29 +0200)]
[MERGE] dev-phylo

2 years ago[VERSION] +1 to 0.0.6.5.1
Alexandre Delanoë [Fri, 30 Sep 2022 12:30:08 +0000 (14:30 +0200)]
[VERSION] +1 to 0.0.6.5.1

2 years ago[ngrams] attempt to fix repo conflicts with `transformWith`
Przemek Kaminski [Fri, 30 Sep 2022 09:27:59 +0000 (11:27 +0200)]
[ngrams] attempt to fix repo conflicts with `transformWith`

But I'm not sure I know what I'm doing...

2 years ago[DOC] Changelog
Alexandre Delanoë [Wed, 28 Sep 2022 09:55:13 +0000 (11:55 +0200)]
[DOC] Changelog

2 years ago[VERSION] +1 to 0.0.6.5
Alexandre Delanoë [Wed, 28 Sep 2022 08:01:11 +0000 (10:01 +0200)]
[VERSION] +1 to 0.0.6.5

2 years ago[FIX] HAL et ISTEX APIs
Alexandre Delanoë [Wed, 28 Sep 2022 08:00:22 +0000 (10:00 +0200)]
[FIX] HAL et ISTEX APIs

2 years ago[FIX] change leader to owner
Alexandre Delanoë [Mon, 26 Sep 2022 09:47:07 +0000 (11:47 +0200)]
[FIX] change leader to owner

2 years agoMerge branch 'dev-merge' into dev
Alexandre Delanoë [Mon, 26 Sep 2022 09:31:00 +0000 (11:31 +0200)]
Merge branch 'dev-merge' into dev

2 years agofix script
Alexandre Delanoë [Mon, 26 Sep 2022 09:30:45 +0000 (11:30 +0200)]
fix script

2 years ago[DOC] changelog
Alexandre Delanoë [Mon, 26 Sep 2022 07:23:46 +0000 (09:23 +0200)]
[DOC] changelog

2 years ago[DOC] changelog
Alexandre Delanoë [Mon, 26 Sep 2022 07:08:56 +0000 (09:08 +0200)]
[DOC] changelog

2 years ago[VERSION] +1 to 0.0.6.4
Alexandre Delanoë [Mon, 26 Sep 2022 06:53:30 +0000 (08:53 +0200)]
[VERSION] +1 to 0.0.6.4

2 years agoMerge remote-tracking branch 'origin/438-dev-team-node-creator' into dev-merge
Alexandre Delanoë [Mon, 26 Sep 2022 06:31:59 +0000 (08:31 +0200)]
Merge remote-tracking branch 'origin/438-dev-team-node-creator' into dev-merge

2 years ago[GQL] Add team leader to query
Karen Konou [Sat, 24 Sep 2022 11:31:56 +0000 (13:31 +0200)]
[GQL] Add team leader to query

2 years ago[VERSION] +1 to 0.0.6.3
Alexandre Delanoë [Fri, 23 Sep 2022 13:53:35 +0000 (15:53 +0200)]
[VERSION] +1 to 0.0.6.3

2 years ago[DOC] default folder name
Alexandre Delanoë [Fri, 23 Sep 2022 13:35:01 +0000 (15:35 +0200)]
[DOC] default folder name

2 years ago[FEAT] Backend NLP French tested
Alexandre Delanoë [Fri, 23 Sep 2022 13:33:43 +0000 (15:33 +0200)]
[FEAT] Backend NLP French tested

2 years ago[DEBUG] message
Alexandre Delanoë [Thu, 22 Sep 2022 16:16:12 +0000 (18:16 +0200)]
[DEBUG] message

2 years agocode review/design
Alexandre Delanoë [Mon, 19 Sep 2022 15:38:59 +0000 (17:38 +0200)]
code review/design

2 years agoDoc/Comments
Alexandre Delanoë [Mon, 19 Sep 2022 13:56:33 +0000 (15:56 +0200)]
Doc/Comments

2 years agoMerge remote-tracking branch 'origin/dev-phylo' into dev-merge
Alexandre Delanoë [Mon, 19 Sep 2022 12:42:19 +0000 (14:42 +0200)]
Merge remote-tracking branch 'origin/dev-phylo' into dev-merge

2 years ago[FIX] Graph Spatialization without confluence
Alexandre Delanoë [Mon, 19 Sep 2022 09:50:00 +0000 (11:50 +0200)]
[FIX] Graph Spatialization without confluence

2 years agoMerge remote-tracking branch 'origin/fix-confluence-indices-bugs' into dev
Alexandre Delanoë [Fri, 16 Sep 2022 07:30:58 +0000 (09:30 +0200)]
Merge remote-tracking branch 'origin/fix-confluence-indices-bugs' into dev

2 years agoFix confluence re-indexing bugs
Alp Mestanogullari [Thu, 15 Sep 2022 16:49:38 +0000 (18:49 +0200)]
Fix confluence re-indexing bugs

2 years ago[FIX] Invitation script
Alexandre Delanoë [Wed, 14 Sep 2022 07:42:28 +0000 (09:42 +0200)]
[FIX] Invitation script

2 years ago[DOC] IsTex API TODO for alter
Alexandre Delanoë [Wed, 14 Sep 2022 06:53:48 +0000 (08:53 +0200)]
[DOC] IsTex API TODO for alter

2 years ago[FIX] IsTex without scrolling finally
Alexandre Delanoë [Tue, 13 Sep 2022 13:10:31 +0000 (15:10 +0200)]
[FIX] IsTex without scrolling finally

2 years agoMerge remote-tracking branch 'origin/141-dev-node-stories-db-optimization' into dev
Alexandre Delanoë [Mon, 12 Sep 2022 18:49:58 +0000 (20:49 +0200)]
Merge remote-tracking branch 'origin/141-dev-node-stories-db-optimization' into dev

2 years ago[nodeStory] fix delete query
Przemek Kaminski [Mon, 12 Sep 2022 18:35:33 +0000 (20:35 +0200)]
[nodeStory] fix delete query

2 years ago[FIX] upgrade script
Alexandre Delanoë [Mon, 12 Sep 2022 17:11:47 +0000 (19:11 +0200)]
[FIX] upgrade script

2 years ago[nodeStory] attempt to fix type error for sql
Przemek Kaminski [Mon, 12 Sep 2022 16:42:28 +0000 (18:42 +0200)]
[nodeStory] attempt to fix type error for sql

2 years agoMerge branch 'dev' into 141-dev-node-stories-db-optimization
Przemek Kaminski [Mon, 12 Sep 2022 15:04:32 +0000 (17:04 +0200)]
Merge branch 'dev' into 141-dev-node-stories-db-optimization

2 years ago[nodeStory] fix version ordering
Przemek Kaminski [Mon, 12 Sep 2022 15:04:17 +0000 (17:04 +0200)]
[nodeStory] fix version ordering

2 years ago[ADMIN] Upgrade script tested
Alexandre Delanoë [Mon, 12 Sep 2022 12:34:20 +0000 (14:34 +0200)]
[ADMIN] Upgrade script tested

2 years ago[FIX] script needs backup
Alexandre Delanoë [Mon, 12 Sep 2022 10:09:12 +0000 (12:09 +0200)]
[FIX] script needs backup

2 years agoscript update
Alexandre Delanoë [Mon, 12 Sep 2022 09:48:15 +0000 (11:48 +0200)]
script update

2 years ago[ADMIN] Upgrade scripts
Alexandre Delanoë [Mon, 12 Sep 2022 09:45:17 +0000 (11:45 +0200)]
[ADMIN] Upgrade scripts

2 years ago[FIX] commenting to fix graph issue
Alexandre Delanoë [Fri, 9 Sep 2022 09:58:04 +0000 (11:58 +0200)]
[FIX] commenting to fix graph issue

2 years ago[DOC] Changelog
Alexandre Delanoë [Fri, 9 Sep 2022 09:03:10 +0000 (11:03 +0200)]
[DOC] Changelog

2 years ago[FIX] HAL changed its schema
Alexandre Delanoë [Fri, 9 Sep 2022 09:02:46 +0000 (11:02 +0200)]
[FIX] HAL changed its schema

2 years ago[VERSION] +1 to 0.0.6.2
Alexandre Delanoë [Fri, 9 Sep 2022 08:27:12 +0000 (10:27 +0200)]
[VERSION] +1 to 0.0.6.2

2 years ago[nodeStory] some attempts to fix showing errors for PGS execute
Przemek Kaminski [Fri, 9 Sep 2022 08:07:39 +0000 (10:07 +0200)]
[nodeStory] some attempts to fix showing errors for PGS execute

2 years agoMerge remote-tracking branch 'origin/debug-nans' into dev
Alexandre Delanoë [Fri, 9 Sep 2022 08:02:22 +0000 (10:02 +0200)]
Merge remote-tracking branch 'origin/debug-nans' into dev

2 years ago[nodeStory] add immediate saver
Przemek Kaminski [Fri, 9 Sep 2022 07:13:54 +0000 (09:13 +0200)]
[nodeStory] add immediate saver

This is used to save when quitting the server. Previous, debounce
save, didn't work properly on exit.

2 years ago[nodeStory] add version to node_story_archive_history
Przemek Kaminski [Thu, 8 Sep 2022 18:07:09 +0000 (20:07 +0200)]
[nodeStory] add version to node_story_archive_history

This is so that we correctly order _a_history later.

2 years agoseemingly fixed 'computeConfluences'
Alp Mestanogullari [Thu, 8 Sep 2022 17:12:28 +0000 (19:12 +0200)]
seemingly fixed 'computeConfluences'

2 years agoMerge branch 'dev' into 141-dev-node-stories-db-optimization
Przemek Kaminski [Thu, 8 Sep 2022 16:51:58 +0000 (18:51 +0200)]
Merge branch 'dev' into 141-dev-node-stories-db-optimization

2 years ago[nodeStory] fix runPGSExecuteMany calls, remove debugging prints
Przemek Kaminski [Thu, 8 Sep 2022 16:51:05 +0000 (18:51 +0200)]
[nodeStory] fix runPGSExecuteMany calls, remove debugging prints

2 years ago[postgres] fix 0.0.6.0 script name, sorting is better
Przemek Kaminski [Thu, 8 Sep 2022 15:57:23 +0000 (17:57 +0200)]
[postgres] fix 0.0.6.0 script name, sorting is better

2 years agooops
Alp Mestanogullari [Wed, 7 Sep 2022 16:41:38 +0000 (18:41 +0200)]
oops

2 years ago[FIX] schema.sql needs upgrade too.
Alexandre Delanoë [Thu, 8 Sep 2022 06:56:32 +0000 (08:56 +0200)]
[FIX] schema.sql needs upgrade too.

2 years ago[DOC] ChangeLog + spacy server on tmux script
Alexandre Delanoë [Wed, 7 Sep 2022 13:41:13 +0000 (15:41 +0200)]
[DOC] ChangeLog + spacy server on tmux script

2 years ago[FIX] Duplicates removed with hash computed on text filtered
Alexandre Delanoë [Wed, 7 Sep 2022 13:39:32 +0000 (15:39 +0200)]
[FIX] Duplicates removed with hash computed on text filtered

2 years ago[DOC] ChangeLog
Alexandre Delanoë [Wed, 7 Sep 2022 13:01:27 +0000 (15:01 +0200)]
[DOC] ChangeLog

2 years ago[FIX][Parser] PubMed bans if too many requests are done per second. Adding a threadDe...
Alexandre Delanoë [Wed, 7 Sep 2022 13:00:29 +0000 (15:00 +0200)]
[FIX][Parser] PubMed bans if too many requests are done per second. Adding a threadDelay seems to fix the issue for now.

2 years ago[DOC] ChangeLog
Alexandre Delanoë [Wed, 7 Sep 2022 12:36:55 +0000 (14:36 +0200)]
[DOC] ChangeLog

2 years ago[MERGE] Upgrading postgresql and ngrams repo changes
Alexandre Delanoë [Wed, 7 Sep 2022 12:35:58 +0000 (14:35 +0200)]
[MERGE] Upgrading postgresql and ngrams repo changes

2 years ago[DOC]
Alexandre Delanoë [Mon, 5 Sep 2022 15:46:16 +0000 (17:46 +0200)]
[DOC]

2 years agoMerge remote-tracking branch 'origin/garg-init-errror-msg' into dev-merge
Alexandre Delanoë [Mon, 5 Sep 2022 15:24:48 +0000 (17:24 +0200)]
Merge remote-tracking branch 'origin/garg-init-errror-msg' into dev-merge

2 years ago[VERSION] +1 to 0.0.6.1
Alexandre Delanoë [Mon, 5 Sep 2022 15:22:20 +0000 (17:22 +0200)]
[VERSION] +1 to 0.0.6.1

2 years ago[FEAT] NLP using Spacy Server
Alexandre Delanoë [Mon, 5 Sep 2022 15:21:25 +0000 (17:21 +0200)]
[FEAT] NLP using Spacy Server

2 years agoCheck that garg-init has been executed at startup, abort with helpful error if not
Alp Mestanogullari [Mon, 5 Sep 2022 10:58:22 +0000 (12:58 +0200)]
Check that garg-init has been executed at startup, abort with helpful error if not

2 years ago[nodeStory] insert/delete/update seems to work, needs more verification
Przemek Kaminski [Fri, 2 Sep 2022 10:53:18 +0000 (12:53 +0200)]
[nodeStory] insert/delete/update seems to work, needs more verification

2 years ago[FIX] prepareText
Alexandre Delanoë [Thu, 1 Sep 2022 16:52:25 +0000 (18:52 +0200)]
[FIX] prepareText

2 years ago[FEAT] Prepare text from Gutemberg
Alexandre Delanoë [Thu, 1 Sep 2022 15:54:50 +0000 (17:54 +0200)]
[FEAT] Prepare text from Gutemberg

2 years ago[WIP] how to clean data text coming from a Book from Gutemberg
Alexandre Delanoë [Thu, 1 Sep 2022 12:49:17 +0000 (14:49 +0200)]
[WIP] how to clean data text coming from a Book from Gutemberg

2 years ago[nodeStory] insert/update/delete state handling
Przemek Kaminski [Wed, 31 Aug 2022 13:57:30 +0000 (15:57 +0200)]
[nodeStory] insert/update/delete state handling

This doesn't work with locks yet.

2 years ago[postgres] upgrade postgres to version 14
Przemek Kaminski [Wed, 31 Aug 2022 13:57:19 +0000 (15:57 +0200)]
[postgres] upgrade postgres to version 14

2 years ago[CLEAN] readFile homonyms
Alexandre Delanoë [Wed, 31 Aug 2022 09:59:46 +0000 (11:59 +0200)]
[CLEAN] readFile homonyms

2 years ago[README] upgrade postres: info about volume
Przemek Kaminski [Tue, 30 Aug 2022 09:04:04 +0000 (11:04 +0200)]
[README] upgrade postres: info about volume

2 years ago[README] updated with section on upgrading postgres in docker
Przemek Kaminski [Tue, 30 Aug 2022 09:02:16 +0000 (11:02 +0200)]
[README] updated with section on upgrading postgres in docker

2 years agoMerge remote-tracking branch 'origin/dev-merge-nix-2' into dev
Alexandre Delanoë [Tue, 30 Aug 2022 07:22:19 +0000 (09:22 +0200)]
Merge remote-tracking branch 'origin/dev-merge-nix-2' into dev

2 years ago[DOC] Changelogs
Alexandre Delanoë [Tue, 30 Aug 2022 07:21:25 +0000 (09:21 +0200)]
[DOC] Changelogs

2 years ago[nodeStory] optimize node_stories table
Przemek Kaminski [Tue, 30 Aug 2022 06:57:19 +0000 (08:57 +0200)]
[nodeStory] optimize node_stories table

Read in backend works now, insert and upsert not yet.

2 years agoMerge remote-tracking branch 'origin/405-dev-lost-password-design' into dev-merge
Alexandre Delanoë [Wed, 24 Aug 2022 09:26:36 +0000 (11:26 +0200)]
Merge remote-tracking branch 'origin/405-dev-lost-password-design' into dev-merge