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gargantext.git
2 years ago[HAL] schools: fix typo
Przemek Kaminski [Fri, 1 Apr 2022 11:31:55 +0000 (13:31 +0200)]
[HAL] schools: fix typo

2 years ago[HAL] IMT: add IP Paris
Przemek Kaminski [Fri, 1 Apr 2022 06:21:40 +0000 (08:21 +0200)]
[HAL] IMT: add IP Paris

2 years ago[IMT] backend serves imt orgs via graphql
Przemek Kaminski [Thu, 31 Mar 2022 12:22:14 +0000 (14:22 +0200)]
[IMT] backend serves imt orgs via graphql

2 years ago[VERSION] +1 to 0.0.5.8.1
Alexandre Delanoë [Tue, 29 Mar 2022 14:52:32 +0000 (16:52 +0200)]
[VERSION] +1 to 0.0.5.8.1

2 years agoMerge branch 'dev-gql-tree-api' of ssh://gitlab.iscpif.fr:20022/gargantext/haskell...
Alexandre Delanoë [Tue, 29 Mar 2022 14:36:08 +0000 (16:36 +0200)]
Merge branch 'dev-gql-tree-api' of ssh://gitlab.iscpif.fr:20022/gargantext/haskell-gargantext into dev-merge

2 years ago[DOC] Versions policy
Alexandre Delanoë [Tue, 29 Mar 2022 14:35:46 +0000 (16:35 +0200)]
[DOC] Versions policy

2 years ago[GQL] Encode NodeType as GQL type
Karen Konou [Mon, 28 Mar 2022 08:46:04 +0000 (10:46 +0200)]
[GQL] Encode NodeType as GQL type

2 years ago[GQL] Tree first level api
Karen Konou [Sat, 26 Mar 2022 10:49:14 +0000 (11:49 +0100)]
[GQL] Tree first level api

2 years agoMerge branch 'dev-merge' into dev
Alexandre Delanoë [Fri, 25 Mar 2022 16:06:44 +0000 (17:06 +0100)]
Merge branch 'dev-merge' into dev

2 years agochangelog
Alexandre Delanoë [Fri, 25 Mar 2022 14:01:16 +0000 (15:01 +0100)]
changelog

2 years ago[CONFIG] stack file update
Alexandre Delanoë [Fri, 25 Mar 2022 14:00:46 +0000 (15:00 +0100)]
[CONFIG] stack file update

2 years agoMerge branch '90-dev-hal-fixes' of ssh://gitlab.iscpif.fr:20022/gargantext/haskell...
Alexandre Delanoë [Fri, 25 Mar 2022 13:45:05 +0000 (14:45 +0100)]
Merge branch '90-dev-hal-fixes' of ssh://gitlab.iscpif.fr:20022/gargantext/haskell-gargantext into dev-merge

2 years ago[FIX] uncommenting debug code
Alexandre Delanoë [Fri, 25 Mar 2022 13:42:26 +0000 (14:42 +0100)]
[FIX] uncommenting debug code

2 years ago[FIX] Ngrams List size with candidates
Alexandre Delanoë [Thu, 24 Mar 2022 12:34:34 +0000 (13:34 +0100)]
[FIX] Ngrams List size with candidates

2 years ago[mail] some small refactoring
Przemek Kaminski [Thu, 24 Mar 2022 11:54:18 +0000 (12:54 +0100)]
[mail] some small refactoring

2 years ago[user] update userLight_email on user info page
Przemek Kaminski [Thu, 24 Mar 2022 11:24:52 +0000 (12:24 +0100)]
[user] update userLight_email on user info page

The ui_cwTouchMail is not used, it should be removed in the future.

2 years ago[VERSION] +1 to 0.0.5.8
Alexandre Delanoë [Thu, 24 Mar 2022 11:22:32 +0000 (12:22 +0100)]
[VERSION] +1 to 0.0.5.8

2 years ago[FIX] reindex ngrams with all documents and with all ngrams
Alexandre Delanoë [Thu, 24 Mar 2022 11:21:46 +0000 (12:21 +0100)]
[FIX] reindex ngrams with all documents and with all ngrams

2 years ago[FEAT] Lang NLP
Alexandre Delanoë [Wed, 23 Mar 2022 11:30:44 +0000 (12:30 +0100)]
[FEAT] Lang NLP

2 years agoChangelog
Alexandre Delanoë [Tue, 22 Mar 2022 16:26:27 +0000 (17:26 +0100)]
Changelog

2 years ago[FIX] Node default names simplified
Alexandre Delanoë [Tue, 22 Mar 2022 16:26:01 +0000 (17:26 +0100)]
[FIX] Node default names simplified

2 years ago[VERSION] +1 to 0.0.5.7.9.1
Alexandre Delanoë [Tue, 22 Mar 2022 16:18:35 +0000 (17:18 +0100)]
[VERSION] +1 to 0.0.5.7.9.1

2 years ago[FIX] NLP API + group revert
Alexandre Delanoë [Tue, 22 Mar 2022 16:17:41 +0000 (17:17 +0100)]
[FIX] NLP API + group revert

2 years ago[VERSION] +1 to 0.0.5.7.9
Alexandre Delanoë [Tue, 22 Mar 2022 12:26:07 +0000 (13:26 +0100)]
[VERSION] +1 to 0.0.5.7.9

2 years ago[FIX] Spinglass not connected components
Alexandre Delanoë [Tue, 22 Mar 2022 12:24:28 +0000 (13:24 +0100)]
[FIX] Spinglass not connected components

2 years agoMerge branch '104-dev-john-snow-nlp' of ssh://gitlab.iscpif.fr:20022/cgenie/haskell...
Alexandre Delanoë [Tue, 22 Mar 2022 09:22:34 +0000 (10:22 +0100)]
Merge branch '104-dev-john-snow-nlp' of ssh://gitlab.iscpif.fr:20022/cgenie/haskell-gargantext into dev-merge

2 years ago[VERSION] +1 to 0.0.5.7.8
Alexandre Delanoë [Tue, 22 Mar 2022 08:33:43 +0000 (09:33 +0100)]
[VERSION] +1 to 0.0.5.7.8

2 years ago[FIX] pubmed upgrade limit
Alexandre Delanoë [Tue, 22 Mar 2022 08:33:10 +0000 (09:33 +0100)]
[FIX] pubmed upgrade limit

2 years agoMerge branch '106-dev-ngrams-score-fix' of ssh://gitlab.iscpif.fr:20022/gargantext...
Alexandre Delanoë [Tue, 22 Mar 2022 08:03:20 +0000 (09:03 +0100)]
Merge branch '106-dev-ngrams-score-fix' of ssh://gitlab.iscpif.fr:20022/gargantext/haskell-gargantext into dev

2 years ago[DOC] ChangeLog Upgrade method
Alexandre Delanoë [Fri, 18 Mar 2022 10:36:51 +0000 (11:36 +0100)]
[DOC] ChangeLog Upgrade method

2 years ago[VERSION] +1 to 0.0.5.7.7
Alexandre Delanoë [Fri, 18 Mar 2022 10:32:07 +0000 (11:32 +0100)]
[VERSION] +1 to 0.0.5.7.7

2 years agoMerge branch 'dev-pairing' into dev
Alexandre Delanoë [Fri, 18 Mar 2022 10:09:40 +0000 (11:09 +0100)]
Merge branch 'dev-pairing' into dev

2 years ago[FEAT] Annuaire <-> Corpus pairing (WIP)
Alexandre Delanoë [Fri, 18 Mar 2022 09:57:18 +0000 (10:57 +0100)]
[FEAT] Annuaire <-> Corpus pairing (WIP)

2 years ago[VERSION] +1 to 0.0.5.7.6
Alexandre Delanoë [Thu, 17 Mar 2022 14:44:15 +0000 (15:44 +0100)]
[VERSION] +1 to 0.0.5.7.6

2 years ago[ngrams] fix for grouping function for ngrams
Przemek Kaminski [Thu, 17 Mar 2022 12:51:55 +0000 (13:51 +0100)]
[ngrams] fix for grouping function for ngrams

For nearby terms `["a", "b", "c"]` we concatenated them into one
`"a b c"`. Instead we should leave the singletons as well:
`["a", "b", "b", "a b", "a c", "b c", "a b c"]`.

2 years ago[VERSION] +1 to 0.0.5.7.5
Alexandre Delanoë [Thu, 17 Mar 2022 11:56:46 +0000 (12:56 +0100)]
[VERSION] +1 to 0.0.5.7.5

2 years ago[conduit] parsers length works so full progress report should work as well
Przemek Kaminski [Wed, 16 Mar 2022 06:39:01 +0000 (07:39 +0100)]
[conduit] parsers length works so full progress report should work as well

2 years ago[conduit] attempt to fix length of parsed docs [does not compile]
Przemek Kaminski [Mon, 14 Mar 2022 06:36:46 +0000 (07:36 +0100)]
[conduit] attempt to fix length of parsed docs [does not compile]

This will show good progress bar.

2 years ago[FIX] warning as error removed
Alexandre Delanoë [Sat, 12 Mar 2022 07:54:17 +0000 (08:54 +0100)]
[FIX] warning as error removed

2 years ago[VERSION] +1 to 0.0.5.7.4
Alexandre Delanoë [Fri, 11 Mar 2022 21:58:45 +0000 (22:58 +0100)]
[VERSION] +1 to 0.0.5.7.4

2 years ago[FIX] UserInfo page get and update, Password hidden in the logs
Alexandre Delanoë [Fri, 11 Mar 2022 21:57:57 +0000 (22:57 +0100)]
[FIX] UserInfo page get and update, Password hidden in the logs

2 years agoMerge branch 'dev-userid-in-auth' of ssh://gitlab.iscpif.fr:20022/gargantext/haskell...
Alexandre Delanoë [Fri, 11 Mar 2022 15:57:22 +0000 (16:57 +0100)]
Merge branch 'dev-userid-in-auth' of ssh://gitlab.iscpif.fr:20022/gargantext/haskell-gargantext into dev-merge

2 years ago[VERSION] +1 to 0.0.5.7.3
Alexandre Delanoë [Fri, 11 Mar 2022 08:11:02 +0000 (09:11 +0100)]
[VERSION] +1 to 0.0.5.7.3

2 years agoMerge branch '90-dev-hal-box-fix' of ssh://gitlab.iscpif.fr:20022/gargantext/haskell...
Alexandre Delanoë [Thu, 10 Mar 2022 15:20:25 +0000 (16:20 +0100)]
Merge branch '90-dev-hal-box-fix' of ssh://gitlab.iscpif.fr:20022/gargantext/haskell-gargantext into dev-merge

2 years ago[VERSION] +1 to 0.0.5.7.2
Alexandre Delanoë [Thu, 10 Mar 2022 14:50:30 +0000 (15:50 +0100)]
[VERSION] +1 to 0.0.5.7.2

2 years ago[zip] implement zip for parsers
Przemek Kaminski [Thu, 10 Mar 2022 11:57:28 +0000 (12:57 +0100)]
[zip] implement zip for parsers

2 years ago[VERSION] +1 to 0.0.5.7.1
Alexandre Delanoë [Thu, 10 Mar 2022 09:49:36 +0000 (10:49 +0100)]
[VERSION] +1 to 0.0.5.7.1

2 years ago[FIX] Phylo Document list
Alexandre Delanoë [Thu, 10 Mar 2022 09:48:00 +0000 (10:48 +0100)]
[FIX] Phylo Document list

2 years ago[DEBUG] Phylo print debug
Alexandre Delanoë [Thu, 10 Mar 2022 08:26:57 +0000 (09:26 +0100)]
[DEBUG] Phylo print debug

2 years ago[conduit] some work towards flow migration to conduit
Przemek Kaminski [Wed, 9 Mar 2022 19:45:34 +0000 (20:45 +0100)]
[conduit] some work towards flow migration to conduit

Doesn't compile yet.

This is somewhere in Flow.hs in types for ConduitT () a m ()
where m monad is IO.

2 years ago[VERSION] +1 to 0.0.5.7
Alexandre Delanoë [Tue, 8 Mar 2022 14:46:14 +0000 (15:46 +0100)]
[VERSION] +1 to 0.0.5.7

2 years ago[FEAT] Phylo Backend Connected (for tests)
Alexandre Delanoë [Tue, 8 Mar 2022 14:45:22 +0000 (15:45 +0100)]
[FEAT] Phylo Backend Connected (for tests)

2 years ago[FEAT] Phylo update
Alexandre Delanoë [Tue, 8 Mar 2022 12:02:24 +0000 (13:02 +0100)]
[FEAT] Phylo update

2 years agoMerge branch 'dev' into dev-phylo
Alexandre Delanoë [Tue, 8 Mar 2022 09:41:33 +0000 (10:41 +0100)]
Merge branch 'dev' into dev-phylo

2 years ago[DEVOPS] postgres create db utility
Alexandre Delanoë [Tue, 8 Mar 2022 09:29:38 +0000 (10:29 +0100)]
[DEVOPS] postgres create db utility

2 years ago[conduit] some more work on conduit in file parser (still doesn't compile)
Przemek Kaminski [Mon, 7 Mar 2022 11:14:14 +0000 (12:14 +0100)]
[conduit] some more work on conduit in file parser (still doesn't compile)

2 years agoMerge branch '90-dev-hal-box-fix' of ssh://gitlab.iscpif.fr:20022/gargantext/haskell...
Przemek Kaminski [Mon, 7 Mar 2022 10:23:20 +0000 (11:23 +0100)]
Merge branch '90-dev-hal-box-fix' of ssh://gitlab.iscpif.fr:20022/gargantext/haskell-gargantext into 90-dev-hal-box-fix

2 years ago[conduit] some work towards migrating file parser to conduit (does not compile)
Przemek Kaminski [Mon, 7 Mar 2022 08:45:53 +0000 (09:45 +0100)]
[conduit] some work towards migrating file parser to conduit (does not compile)

2 years agoupdate changelog
Alexandre Delanoë [Fri, 4 Mar 2022 14:28:28 +0000 (15:28 +0100)]
update changelog

2 years ago[FEAT] updateUsersPassword
Alexandre Delanoë [Fri, 4 Mar 2022 14:26:10 +0000 (15:26 +0100)]
[FEAT] updateUsersPassword

2 years ago[VERSION] +1 to 0.0.5.6.7
Alexandre Delanoë [Fri, 4 Mar 2022 14:03:47 +0000 (15:03 +0100)]
[VERSION] +1 to 0.0.5.6.7

2 years agoMerge branch '90-dev-max-docs-scrapers-parsers' of ssh://gitlab.iscpif.fr:20022/garga...
Alexandre Delanoë [Fri, 4 Mar 2022 13:36:59 +0000 (14:36 +0100)]
Merge branch '90-dev-max-docs-scrapers-parsers' of ssh://gitlab.iscpif.fr:20022/gargantext/haskell-gargantext into dev-merge

2 years ago[VERSION] +1 to 0.0.5.6.6
Alexandre Delanoë [Thu, 3 Mar 2022 16:10:10 +0000 (17:10 +0100)]
[VERSION] +1 to 0.0.5.6.6

2 years ago[FIX] When posting new list as file, reindex after
Alexandre Delanoë [Thu, 3 Mar 2022 16:09:14 +0000 (17:09 +0100)]
[FIX] When posting new list as file, reindex after

2 years ago[FIX] V3 Ngrams List post/update with CSV format
Alexandre Delanoë [Thu, 3 Mar 2022 13:42:16 +0000 (14:42 +0100)]
[FIX] V3 Ngrams List post/update with CSV format

2 years ago[scrapers] fix limit with MAX_DOCS_SCRAPERS
Przemek Kaminski [Thu, 3 Mar 2022 09:43:07 +0000 (10:43 +0100)]
[scrapers] fix limit with MAX_DOCS_SCRAPERS

2 years ago[VERSION] +1 to 0.0.5.6.5
Alexandre Delanoë [Wed, 2 Mar 2022 10:00:50 +0000 (11:00 +0100)]
[VERSION] +1 to 0.0.5.6.5

2 years agoMerge branch '111-dev-refactor-text-corpus-api-with-conduit-alp' of ssh://gitlab...
Alexandre Delanoë [Wed, 2 Mar 2022 09:09:23 +0000 (10:09 +0100)]
Merge branch '111-dev-refactor-text-corpus-api-with-conduit-alp' of ssh://gitlab.iscpif.fr:20022/gargantext/haskell-gargantext into dev

2 years ago[conduit] update commits for pubmed/hal
Przemek Kaminski [Wed, 2 Mar 2022 07:31:09 +0000 (08:31 +0100)]
[conduit] update commits for pubmed/hal

2 years ago[conduit] some refactoring
Przemek Kaminski [Wed, 2 Mar 2022 07:25:13 +0000 (08:25 +0100)]
[conduit] some refactoring

2 years ago[corpus new] add info about current doc id
Przemek Kaminski [Tue, 1 Mar 2022 07:13:04 +0000 (08:13 +0100)]
[corpus new] add info about current doc id

This is for debugging purposes for the Prelude.read error.

2 years ago[BIN] gargantext-client config for stack
Alexandre Delanoë [Mon, 28 Feb 2022 16:11:20 +0000 (17:11 +0100)]
[BIN] gargantext-client config for stack

2 years ago[VERSION] +1 to 0.0.5.6.4
Alexandre Delanoë [Mon, 28 Feb 2022 09:35:33 +0000 (10:35 +0100)]
[VERSION] +1 to 0.0.5.6.4

2 years ago[refactoring] remove Prelude.read which causes difficult to debug errors
Przemek Kaminski [Thu, 24 Feb 2022 13:28:58 +0000 (14:28 +0100)]
[refactoring] remove Prelude.read which causes difficult to debug errors

Instead use Text.Read.readMaybe and panic with custom error message.

2 years ago[conduit] implement conduit for Hal, Pubmed
Przemek Kaminski [Thu, 24 Feb 2022 06:28:48 +0000 (07:28 +0100)]
[conduit] implement conduit for Hal, Pubmed

2 years agofix some Conduit wiring, lifting IO conduit to a more generic setting
Alp Mestanogullari [Tue, 22 Feb 2022 11:31:20 +0000 (12:31 +0100)]
fix some Conduit wiring, lifting IO conduit to a more generic setting

2 years agoMerge branch 'dev' into 111-dev-refactor-text-corpus-api-with-conduit
Przemek Kaminski [Mon, 21 Feb 2022 08:52:06 +0000 (09:52 +0100)]
Merge branch 'dev' into 111-dev-refactor-text-corpus-api-with-conduit

2 years ago[text-api] first rewrite using Conduit
Przemek Kaminski [Fri, 18 Feb 2022 20:12:19 +0000 (21:12 +0100)]
[text-api] first rewrite using Conduit

NOTE This doesn't compile yet.

2 years ago[hal] use conduit for hal parsing
Przemek Kaminski [Fri, 18 Feb 2022 17:17:12 +0000 (18:17 +0100)]
[hal] use conduit for hal parsing

This still isn't optimal because in our code we use lists, so this
will fetch everything (using conduit), coerce into a list and then
process.

2 years ago[DEBUG] adding trace
Alexandre Delanoë [Fri, 18 Feb 2022 11:21:01 +0000 (12:21 +0100)]
[DEBUG] adding trace

2 years ago[DEBUG] AddDocument
Alexandre Delanoë [Fri, 18 Feb 2022 11:12:44 +0000 (12:12 +0100)]
[DEBUG] AddDocument

2 years ago[FIX] Export Phylo Ratio
Alexandre Delanoë [Thu, 17 Feb 2022 15:31:47 +0000 (16:31 +0100)]
[FIX] Export Phylo Ratio

2 years ago[Auth] add user_id to auth response
Karen Konou [Thu, 17 Feb 2022 15:30:07 +0000 (16:30 +0100)]
[Auth] add user_id to auth response

2 years ago[FIX][PHYLO] SubConfi simplification
Alexandre Delanoë [Thu, 17 Feb 2022 15:06:42 +0000 (16:06 +0100)]
[FIX][PHYLO] SubConfi simplification

2 years ago[FIX] Example Cleopatre Date hack
Alexandre Delanoë [Thu, 17 Feb 2022 14:45:24 +0000 (15:45 +0100)]
[FIX] Example Cleopatre Date hack

2 years ago[FIX] dot path
Alexandre Delanoë [Thu, 17 Feb 2022 14:24:27 +0000 (15:24 +0100)]
[FIX] dot path

2 years ago[FEAT][PHYLO] update parameters with PhyloSubConfig
Alexandre Delanoë [Tue, 15 Feb 2022 14:53:43 +0000 (15:53 +0100)]
[FEAT][PHYLO] update parameters with PhyloSubConfig

2 years ago[VERSION] +1 to 0.0.5.6.3
Alexandre Delanoë [Thu, 17 Feb 2022 08:07:55 +0000 (09:07 +0100)]
[VERSION] +1 to 0.0.5.6.3

2 years ago[FIX][EXPORT][GEXF] size of nodes were lacking
Alexandre Delanoë [Thu, 17 Feb 2022 08:07:27 +0000 (09:07 +0100)]
[FIX][EXPORT][GEXF] size of nodes were lacking

2 years ago[VERSION] +1 to 0.0.5.6.2
Alexandre Delanoë [Wed, 16 Feb 2022 13:07:58 +0000 (14:07 +0100)]
[VERSION] +1 to 0.0.5.6.2

2 years ago[VERSION] +1 to 0.0.5.6.1
Alexandre Delanoë [Tue, 15 Feb 2022 09:59:54 +0000 (10:59 +0100)]
[VERSION] +1 to 0.0.5.6.1

2 years ago[FEAT] Clustering Method Confluence backend connection
Alexandre Delanoë [Tue, 15 Feb 2022 09:58:45 +0000 (10:58 +0100)]
[FEAT] Clustering Method Confluence backend connection

2 years ago[VERSION] +1 to 0.0.5.6
Alexandre Delanoë [Mon, 14 Feb 2022 13:36:12 +0000 (14:36 +0100)]
[VERSION] +1 to 0.0.5.6

2 years ago[API] Phylo backend basic connection
Alexandre Delanoë [Mon, 14 Feb 2022 10:36:34 +0000 (11:36 +0100)]
[API] Phylo backend basic connection

2 years ago[REBASE] Dev <-> dev-phylo
Alexandre Delanoë [Mon, 14 Feb 2022 08:29:25 +0000 (09:29 +0100)]
[REBASE] Dev <-> dev-phylo

2 years ago[FEAT] Bulding phylo with graphviz
Alexandre Delanoë [Fri, 11 Feb 2022 11:23:14 +0000 (12:23 +0100)]
[FEAT] Bulding phylo with graphviz

2 years ago[FEAT] FlowPhylo implemented
Alexandre Delanoë [Fri, 11 Feb 2022 10:27:17 +0000 (11:27 +0100)]
[FEAT] FlowPhylo implemented

2 years ago[CONFIG] fixing default config (and removing spaces at end of lines)
Alexandre Delanoë [Tue, 8 Feb 2022 08:42:35 +0000 (09:42 +0100)]
[CONFIG] fixing default config (and removing spaces at end of lines)

2 years agofix
qlobbe [Thu, 20 Jan 2022 10:21:37 +0000 (11:21 +0100)]
fix

2 years agochanges done
qlobbe [Fri, 9 Jul 2021 08:13:45 +0000 (10:13 +0200)]
changes done