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22 months agoMerge remote-tracking branch 'origin/adinapoli/issue-180-deps-audit' into dev
Alexandre Delanoë [Thu, 16 Feb 2023 14:33:39 +0000 (15:33 +0100)]
Merge remote-tracking branch 'origin/adinapoli/issue-180-deps-audit' into dev

22 months agoDrop unused servant-static-th
Alfredo Di Napoli [Thu, 16 Feb 2023 07:50:38 +0000 (08:50 +0100)]
Drop unused servant-static-th

This commit removes the `servant-static-th` dependency from the project,
because it turns out we weren't using this package, and furthemore we
were depending on a fork of the latter.

22 months agoSwitch to Hackage version of hstatistics
Alfredo Di Napoli [Thu, 16 Feb 2023 07:34:41 +0000 (08:34 +0100)]
Switch to Hackage version of hstatistics

We were depending on Alexandre's fork of `hstatistics`, but in the
meantime his changes got merged upstream and the maintainer release
version `0.3.1` on Hackage, so this commit changes the `stack.yaml` file
to use that.

22 months ago[ngrams] some work towards getting the aggregate doc count
Przemysław Kaminski [Wed, 15 Feb 2023 18:38:18 +0000 (19:38 +0100)]
[ngrams] some work towards getting the aggregate doc count

22 months ago[DOC] README
Alexandre Delanoë [Wed, 15 Feb 2023 14:27:23 +0000 (15:27 +0100)]
[DOC] README

22 months agoMerge remote-tracking branch 'origin/dev-177-DoorWelcome' into dev
Alexandre Delanoë [Wed, 15 Feb 2023 13:38:22 +0000 (14:38 +0100)]
Merge remote-tracking branch 'origin/dev-177-DoorWelcome' into dev

22 months agoWIP: readme
Fabien Manière [Wed, 15 Feb 2023 13:33:11 +0000 (14:33 +0100)]
WIP: readme

22 months ago[DOC]
Alexandre Delanoë [Mon, 13 Feb 2023 15:59:01 +0000 (16:59 +0100)]
[DOC]

22 months agoMerge remote-tracking branch 'origin/adinapoli/issue-180-deps-audit' into dev
Alexandre Delanoë [Mon, 13 Feb 2023 15:57:29 +0000 (16:57 +0100)]
Merge remote-tracking branch 'origin/adinapoli/issue-180-deps-audit' into dev

22 months ago[DOC] ChangeLog
Alexandre Delanoë [Mon, 13 Feb 2023 15:37:18 +0000 (16:37 +0100)]
[DOC] ChangeLog

22 months ago[VERSION] +1 to 0.0.6.9.4.4
Alexandre Delanoë [Mon, 13 Feb 2023 15:31:51 +0000 (16:31 +0100)]
[VERSION] +1 to 0.0.6.9.4.4

22 months ago[STACK] crawler pubmed fixes
Alexandre Delanoë [Mon, 13 Feb 2023 15:19:32 +0000 (16:19 +0100)]
[STACK] crawler pubmed fixes

22 months agoDrop unused monad-logger-aeson dependency
Alfredo Di Napoli [Mon, 13 Feb 2023 14:33:17 +0000 (15:33 +0100)]
Drop unused monad-logger-aeson dependency

22 months agoAdd script to track Haskell deps
Alfredo Di Napoli [Mon, 13 Feb 2023 09:54:19 +0000 (10:54 +0100)]
Add script to track Haskell deps

22 months ago[FIX] Opaleye Query
Alexandre Delanoë [Mon, 13 Feb 2023 10:12:57 +0000 (11:12 +0100)]
[FIX] Opaleye Query

22 months agoRestore tests
Alfredo Di Napoli [Mon, 13 Feb 2023 09:37:27 +0000 (10:37 +0100)]
Restore tests

22 months agoAdd support for weeder
Alfredo Di Napoli [Mon, 13 Feb 2023 08:42:17 +0000 (09:42 +0100)]
Add support for weeder

22 months agoAdd optional Accelerate dependency on Darwin for pkgs.nix
Alfredo Di Napoli [Sun, 5 Feb 2023 12:44:10 +0000 (13:44 +0100)]
Add optional Accelerate dependency on Darwin for pkgs.nix

On Mac, building `gargantext` requires linking against the
Accelerate framework (completely unrelated to the `accelerate` Haskell
package!). This patch provides an extra `pkgs.nix` directive that will
kick in only when building on Darwin.

22 months ago[opaleye] remove ReadNull type instances
Przemysław Kaminski [Fri, 10 Feb 2023 08:34:17 +0000 (09:34 +0100)]
[opaleye] remove ReadNull type instances

They are changed to MaybeFields ...Read instead when joining.

22 months ago[VERSION] +1 to 0.0.6.9.4.3
Alexandre Delanoë [Thu, 9 Feb 2023 15:59:00 +0000 (16:59 +0100)]
[VERSION] +1 to 0.0.6.9.4.3

22 months agoMerge remote-tracking branch 'origin/175-dev-doc-table-count' into dev-merge
Alexandre Delanoë [Thu, 9 Feb 2023 14:38:41 +0000 (15:38 +0100)]
Merge remote-tracking branch 'origin/175-dev-doc-table-count' into dev-merge

22 months ago[refactor] upgrade opaleye to 0.9.6.1
Przemysław Kaminski [Thu, 9 Feb 2023 11:18:36 +0000 (12:18 +0100)]
[refactor] upgrade opaleye to 0.9.6.1

Remove joins, use optionalRestrict instead.

Also, remove cabal.project because stack.yaml and package.yaml cover
dependencies already.

22 months agoreadme
fabien [Thu, 9 Feb 2023 11:04:41 +0000 (12:04 +0100)]
readme

22 months agoUpdate README.md
Fabien Maniere [Tue, 7 Feb 2023 14:50:31 +0000 (15:50 +0100)]
Update README.md

22 months ago[VERSION] +1 to 0.0.6.9.4.2
Alexandre Delanoë [Fri, 3 Feb 2023 13:28:26 +0000 (14:28 +0100)]
[VERSION] +1 to 0.0.6.9.4.2

22 months ago[VERSION] +1 to 0.0.6.9.4.1
Alexandre Delanoë [Wed, 1 Feb 2023 14:29:03 +0000 (15:29 +0100)]
[VERSION] +1 to 0.0.6.9.4.1

22 months ago[DEBUG] Message
Alexandre Delanoë [Wed, 1 Feb 2023 14:23:29 +0000 (15:23 +0100)]
[DEBUG] Message

22 months ago[FIX] WOS Parser
Alexandre Delanoë [Tue, 31 Jan 2023 14:21:17 +0000 (15:21 +0100)]
[FIX] WOS Parser

22 months ago[DOC]
Alexandre Delanoë [Mon, 30 Jan 2023 14:30:54 +0000 (15:30 +0100)]
[DOC]

22 months ago[MERGE]
Alexandre Delanoë [Mon, 30 Jan 2023 14:09:59 +0000 (15:09 +0100)]
[MERGE]

22 months ago[DOC]
Alexandre Delanoë [Mon, 30 Jan 2023 10:47:14 +0000 (11:47 +0100)]
[DOC]

22 months ago[FIX] #173 Ngrams Change insert causes Database error
Alexandre Delanoë [Mon, 30 Jan 2023 10:46:49 +0000 (11:46 +0100)]
[FIX] #173 Ngrams Change insert causes Database error

22 months ago[VERSION] +1 to 0.0.6.9.4
Alexandre Delanoë [Mon, 30 Jan 2023 10:05:38 +0000 (11:05 +0100)]
[VERSION] +1 to 0.0.6.9.4

22 months ago[FIX] BUG email/username uniforming to Lower case
Alexandre Delanoë [Mon, 30 Jan 2023 09:59:57 +0000 (10:59 +0100)]
[FIX] BUG email/username uniforming to Lower case

22 months ago[Node Write Analysis] Change types
Karen Konou [Sun, 29 Jan 2023 11:17:09 +0000 (12:17 +0100)]
[Node Write Analysis] Change types

22 months agoMerge branch 'dev' into 164-dev-node-write-analysis
Karen Konou [Sun, 29 Jan 2023 11:15:43 +0000 (12:15 +0100)]
Merge branch 'dev' into 164-dev-node-write-analysis

23 months ago[WIP] How to graph my writings ?
Alexandre Delanoë [Fri, 27 Jan 2023 15:54:03 +0000 (16:54 +0100)]
[WIP] How to graph my writings ?

23 months ago[VERSION] +1 to 0.0.6.9.3
Alexandre Delanoë [Thu, 26 Jan 2023 13:59:58 +0000 (14:59 +0100)]
[VERSION] +1 to 0.0.6.9.3

23 months agoMerge remote-tracking branch 'origin/dev-hackathon-fixes' into dev-merge
Alexandre Delanoë [Thu, 26 Jan 2023 13:45:34 +0000 (14:45 +0100)]
Merge remote-tracking branch 'origin/dev-hackathon-fixes' into dev-merge

23 months ago[FEAT] Improving NodeWriteParsing
Alexandre Delanoë [Wed, 25 Jan 2023 13:35:44 +0000 (14:35 +0100)]
[FEAT] Improving NodeWriteParsing

23 months ago[refactoring] add StrictData option, refactor Data.Map to Strict
Przemysław Kaminski [Wed, 25 Jan 2023 13:19:26 +0000 (14:19 +0100)]
[refactoring] add StrictData option, refactor Data.Map to Strict

Based on the suggestions in
https://kodimensional.dev/space-leak

23 months ago[graphql] fixes to the ngrams context endpoint
Przemysław Kaminski [Wed, 25 Jan 2023 13:16:13 +0000 (14:16 +0100)]
[graphql] fixes to the ngrams context endpoint

23 months ago[DOC]
Alexandre Delanoë [Tue, 24 Jan 2023 14:57:22 +0000 (15:57 +0100)]
[DOC]

23 months ago[FIX] NodeWrites parsing first fix
Alexandre Delanoë [Tue, 24 Jan 2023 14:56:52 +0000 (15:56 +0100)]
[FIX] NodeWrites parsing first fix

23 months ago[nodestory] fix INSERT function so that it is performed only...
Przemysław Kaminski [Mon, 23 Jan 2023 14:49:52 +0000 (15:49 +0100)]
[nodestory] fix INSERT function so that it is performed only...

...when node_id exists in the DB

Warning: this silently avoids insertion of patches when node_id is
missing for some reason in the history.

23 months agoMerge branch 'dev' into dev-hackathon-fixes
Przemysław Kaminski [Mon, 23 Jan 2023 13:22:24 +0000 (14:22 +0100)]
Merge branch 'dev' into dev-hackathon-fixes

23 months ago[graph] some refactoring of Core.Viz.Graph
Przemysław Kaminski [Mon, 23 Jan 2023 09:08:00 +0000 (10:08 +0100)]
[graph] some refactoring of Core.Viz.Graph

23 months ago[DOC]
Alexandre Delanoë [Mon, 23 Jan 2023 08:24:05 +0000 (09:24 +0100)]
[DOC]

23 months ago[READ] Code clean
Alexandre Delanoë [Fri, 20 Jan 2023 21:26:45 +0000 (22:26 +0100)]
[READ] Code clean

23 months ago[VERSION] +1 to 0.0.6.9.2
Alexandre Delanoë [Fri, 20 Jan 2023 10:04:52 +0000 (11:04 +0100)]
[VERSION] +1 to 0.0.6.9.2

23 months ago[FIX] List Learning is back
Alexandre Delanoë [Fri, 20 Jan 2023 10:04:19 +0000 (11:04 +0100)]
[FIX] List Learning is back

23 months ago[Node write upload] Add params
Karen Konou [Thu, 19 Jan 2023 11:17:09 +0000 (12:17 +0100)]
[Node write upload] Add params

23 months agoMerge remote-tracking branch 'origin/dev-hackathon-fixes' into dev
Alexandre Delanoë [Thu, 19 Jan 2023 09:52:14 +0000 (10:52 +0100)]
Merge remote-tracking branch 'origin/dev-hackathon-fixes' into dev

23 months ago[social] fixes for more qualified imports
Przemysław Kaminski [Wed, 18 Jan 2023 19:11:41 +0000 (20:11 +0100)]
[social] fixes for more qualified imports

It's easier to find types and functions that are used in code this
way.

23 months agoMerge branch 'dev' into dev-hackathon-fixes
Przemysław Kaminski [Wed, 18 Jan 2023 18:23:12 +0000 (19:23 +0100)]
Merge branch 'dev' into dev-hackathon-fixes

23 months agoMerge remote-tracking branch 'origin/dev-hackathon-fixes' into dev
Alexandre Delanoë [Mon, 16 Jan 2023 19:19:03 +0000 (20:19 +0100)]
Merge remote-tracking branch 'origin/dev-hackathon-fixes' into dev

23 months ago[graphql] endpoint for contexts_for_ngrams
Przemysław Kaminski [Sat, 14 Jan 2023 06:59:51 +0000 (07:59 +0100)]
[graphql] endpoint for contexts_for_ngrams

23 months ago[DOC]
Alexandre Delanoë [Fri, 13 Jan 2023 16:33:55 +0000 (17:33 +0100)]
[DOC]

23 months ago[VERSION] +1 to 0.0.6.9.1
Alexandre Delanoë [Fri, 13 Jan 2023 09:21:04 +0000 (10:21 +0100)]
[VERSION] +1 to 0.0.6.9.1

23 months ago[DOC]
Alexandre Delanoë [Thu, 12 Jan 2023 06:51:36 +0000 (07:51 +0100)]
[DOC]

23 months ago[FIX] Advanced Bridgeness test
Alexandre Delanoë [Thu, 12 Jan 2023 06:50:29 +0000 (07:50 +0100)]
[FIX] Advanced Bridgeness test

23 months ago[DOC]
Alexandre Delanoë [Thu, 12 Jan 2023 06:48:34 +0000 (07:48 +0100)]
[DOC]

23 months ago[graphql] nodeContext score update mutation
Przemysław Kaminski [Wed, 11 Jan 2023 13:50:58 +0000 (14:50 +0100)]
[graphql] nodeContext score update mutation

23 months agoMerge branch 'dev' into dev-hackathon-fixes
Przemysław Kaminski [Wed, 11 Jan 2023 12:28:53 +0000 (13:28 +0100)]
Merge branch 'dev' into dev-hackathon-fixes

23 months ago[graphql] implement an endpoint for node contexts
Przemysław Kaminski [Wed, 11 Jan 2023 12:28:24 +0000 (13:28 +0100)]
[graphql] implement an endpoint for node contexts

23 months ago[FIX]
Alexandre Delanoë [Wed, 11 Jan 2023 12:12:47 +0000 (13:12 +0100)]
[FIX]

23 months ago[TEST] Bridgeness Advanced is not filtering for tests
Alexandre Delanoë [Wed, 11 Jan 2023 12:06:28 +0000 (13:06 +0100)]
[TEST] Bridgeness Advanced is not filtering for tests

23 months ago[DOC]
Alexandre Delanoë [Tue, 10 Jan 2023 18:52:21 +0000 (19:52 +0100)]
[DOC]

23 months agoMerge remote-tracking branch 'origin/dev' into dev
Alexandre Delanoë [Tue, 10 Jan 2023 18:24:13 +0000 (19:24 +0100)]
Merge remote-tracking branch 'origin/dev' into dev

23 months ago[DOC]
Alexandre Delanoë [Tue, 10 Jan 2023 18:22:53 +0000 (19:22 +0100)]
[DOC]

23 months ago[FIX] Duplicates
Alexandre Delanoë [Tue, 10 Jan 2023 18:22:19 +0000 (19:22 +0100)]
[FIX] Duplicates

23 months agonew strategy for choosing temporal matching candidates
qlobbe [Tue, 10 Jan 2023 17:53:05 +0000 (18:53 +0100)]
new strategy for choosing temporal matching candidates

23 months agoMerge branch 'dev' into dev-hackathon-fixes
Przemek Kaminski [Tue, 10 Jan 2023 15:11:13 +0000 (16:11 +0100)]
Merge branch 'dev' into dev-hackathon-fixes

23 months ago[ngrams] fixes for list JSON import
Przemek Kaminski [Tue, 10 Jan 2023 15:04:28 +0000 (16:04 +0100)]
[ngrams] fixes for list JSON import

23 months agoInstruction for launching detailed
david Chavalarias [Tue, 10 Jan 2023 14:47:06 +0000 (15:47 +0100)]
Instruction for launching detailed

23 months agoUpdate README.md Minor update - instruction for nix-env
david Chavalarias [Tue, 10 Jan 2023 14:42:37 +0000 (15:42 +0100)]
Update README.md Minor update - instruction for nix-env

23 months ago[DOC] ChangeLog
Alexandre Delanoë [Tue, 10 Jan 2023 10:06:56 +0000 (11:06 +0100)]
[DOC] ChangeLog

23 months ago[DOC]
Alexandre Delanoë [Tue, 10 Jan 2023 09:59:22 +0000 (10:59 +0100)]
[DOC]

23 months ago[corpus] export json as attachment, doesn't open web page with json content
Przemek Kaminski [Tue, 10 Jan 2023 09:49:25 +0000 (10:49 +0100)]
[corpus] export json as attachment, doesn't open web page with json content

23 months ago[FIX] cabal file
Alexandre Delanoë [Tue, 10 Jan 2023 09:41:07 +0000 (10:41 +0100)]
[FIX] cabal file

23 months ago[ngrams] make ngrams search case-insensitive
Przemek Kaminski [Tue, 10 Jan 2023 09:35:24 +0000 (10:35 +0100)]
[ngrams] make ngrams search case-insensitive

23 months agoMerge remote-tracking branch 'origin/481-dev-node-calc-upload' into dev
Alexandre Delanoë [Tue, 10 Jan 2023 09:32:21 +0000 (10:32 +0100)]
Merge remote-tracking branch 'origin/481-dev-node-calc-upload' into dev

23 months ago[VERSION] +1 to 0.0.6.9.0
Alexandre Delanoë [Tue, 10 Jan 2023 09:32:02 +0000 (10:32 +0100)]
[VERSION] +1 to 0.0.6.9.0

23 months ago[FEAT] FrameWrite Corpus improvement
Alexandre Delanoë [Tue, 10 Jan 2023 09:26:17 +0000 (10:26 +0100)]
[FEAT] FrameWrite Corpus improvement

23 months ago[table] add option to sort by tag
Przemek Kaminski [Mon, 9 Jan 2023 17:38:49 +0000 (18:38 +0100)]
[table] add option to sort by tag

23 months ago[gexf] fixes to the GEXF file format
Przemek Kaminski [Mon, 9 Jan 2023 14:18:25 +0000 (15:18 +0100)]
[gexf] fixes to the GEXF file format

23 months ago[export] texts: attachment with filename
Przemek Kaminski [Mon, 9 Jan 2023 13:59:21 +0000 (14:59 +0100)]
[export] texts: attachment with filename

23 months ago[Node calc upload] options
Karen Konou [Sat, 7 Jan 2023 11:08:02 +0000 (12:08 +0100)]
[Node calc upload] options

23 months ago[WIP] [Teams] Members list for autocomplete
Karen Konou [Sat, 7 Jan 2023 09:28:40 +0000 (10:28 +0100)]
[WIP] [Teams] Members list for autocomplete

23 months ago[DOC] ChangeLog
Alexandre Delanoë [Thu, 5 Jan 2023 13:32:10 +0000 (14:32 +0100)]
[DOC] ChangeLog

23 months ago[patch] fixes for missing transformWith clause in patch apply
Przemek Kaminski [Thu, 5 Jan 2023 11:14:08 +0000 (12:14 +0100)]
[patch] fixes for missing transformWith clause in patch apply

23 months ago[VERSION] +1 to 0.0.6.8.6
Alexandre Delanoë [Wed, 4 Jan 2023 13:41:05 +0000 (14:41 +0100)]
[VERSION] +1 to 0.0.6.8.6

23 months ago[ngrams] list csv/json export endpoints
Przemek Kaminski [Tue, 3 Jan 2023 20:00:38 +0000 (21:00 +0100)]
[ngrams] list csv/json export endpoints

23 months ago[graphql] add description to UserInfo
Przemek Kaminski [Tue, 3 Jan 2023 08:06:27 +0000 (09:06 +0100)]
[graphql] add description to UserInfo

23 months ago[ngrams] WIP CSV export work
Przemek Kaminski [Tue, 3 Jan 2023 06:16:26 +0000 (07:16 +0100)]
[ngrams] WIP CSV export work

23 months ago[envrc] export LANG to fix some ghc compile errors
Przemek Kaminski [Mon, 2 Jan 2023 18:37:15 +0000 (19:37 +0100)]
[envrc] export LANG to fix some ghc compile errors

23 months ago[FIX] API upload
Alexandre Delanoë [Mon, 2 Jan 2023 12:08:15 +0000 (13:08 +0100)]
[FIX] API upload

23 months ago[MERGE] stack repo
Alexandre Delanoë [Mon, 2 Jan 2023 09:41:55 +0000 (10:41 +0100)]
[MERGE] stack repo

23 months ago[VERSION] +1 to 0.0.6.8.5.9.4
Alexandre Delanoë [Mon, 2 Jan 2023 09:09:59 +0000 (10:09 +0100)]
[VERSION] +1 to 0.0.6.8.5.9.4

23 months ago[FIX] Pubmed API
Alexandre Delanoë [Mon, 2 Jan 2023 09:07:38 +0000 (10:07 +0100)]
[FIX] Pubmed API