]> Git — Sourcephile - gargantext.git/log
gargantext.git
5 years agoMerge branch 'dev-phylo' of https://gitlab.iscpif.fr/gargantext/haskell-gargantext...
qlobbe [Mon, 15 Apr 2019 14:52:05 +0000 (16:52 +0200)]
Merge branch 'dev-phylo' of https://gitlab.iscpif.fr/gargantext/haskell-gargantext into dev-phylo

5 years agofix some bugs
qlobbe [Mon, 15 Apr 2019 14:51:34 +0000 (16:51 +0200)]
fix some bugs

5 years ago[FIX] Warnings at compilation.
Alexandre Delanoë [Mon, 15 Apr 2019 10:11:05 +0000 (12:11 +0200)]
[FIX] Warnings at compilation.

5 years ago[BIN/PHYLO] first draft, needs phylo connection.
Alexandre Delanoë [Mon, 15 Apr 2019 09:38:28 +0000 (11:38 +0200)]
[BIN/PHYLO] first draft, needs phylo connection.

5 years agoFix some warnings
qlobbe [Fri, 12 Apr 2019 09:14:26 +0000 (11:14 +0200)]
Fix some warnings

5 years ago[GRAPH] Sorting the nodes.
Alexandre Delanoë [Fri, 12 Apr 2019 07:42:26 +0000 (09:42 +0200)]
[GRAPH] Sorting the nodes.

5 years agojust finalized the dot export
qlobbe [Thu, 11 Apr 2019 10:24:37 +0000 (12:24 +0200)]
just finalized the dot export

5 years agoAdd the dot export
qlobbe [Wed, 10 Apr 2019 16:11:51 +0000 (18:11 +0200)]
Add the dot export

5 years agoWorking on dot export
qlobbe [Tue, 9 Apr 2019 15:21:21 +0000 (17:21 +0200)]
Working on dot export

5 years ago[API][PHYLO] Get + Post (put not implemented yet) + Del same as others nodes.
Alexandre Delanoë [Mon, 8 Apr 2019 15:37:24 +0000 (17:37 +0200)]
[API][PHYLO] Get + Post (put not implemented yet) + Del same as others nodes.

5 years ago[REST][PHYLO] Parameters, todo: test query.
Alexandre Delanoë [Mon, 8 Apr 2019 13:52:48 +0000 (15:52 +0200)]
[REST][PHYLO] Parameters, todo: test query.

5 years ago[VIZ.API][FACTO]
Alexandre Delanoë [Mon, 8 Apr 2019 08:58:15 +0000 (10:58 +0200)]
[VIZ.API][FACTO]

5 years ago[FACTO] VIZ.APIS
Alexandre Delanoë [Mon, 8 Apr 2019 08:30:35 +0000 (10:30 +0200)]
[FACTO] VIZ.APIS

5 years ago[PHYLO][API] Get implemented.
Alexandre Delanoë [Sat, 6 Apr 2019 13:39:40 +0000 (15:39 +0200)]
[PHYLO][API] Get implemented.

5 years ago[FIX] getNeighbours False instead of True (commit 4cbd0eb4) TODO check behavior.
Alexandre Delanoë [Fri, 5 Apr 2019 20:25:26 +0000 (22:25 +0200)]
[FIX] getNeighbours False instead of True (commit 4cbd0eb4) TODO check behavior.

5 years ago[FIX] heads.
Alexandre Delanoë [Fri, 5 Apr 2019 15:59:00 +0000 (17:59 +0200)]
[FIX] heads.

5 years ago[PHYLO.API] REST GET.
Alexandre Delanoë [Fri, 5 Apr 2019 15:32:26 +0000 (17:32 +0200)]
[PHYLO.API] REST GET.

5 years ago[PHYLO.API] missing file.
Alexandre Delanoë [Fri, 5 Apr 2019 15:25:07 +0000 (17:25 +0200)]
[PHYLO.API] missing file.

5 years ago[PHYLO.API] Adding REST functions.
Alexandre Delanoë [Fri, 5 Apr 2019 15:21:27 +0000 (17:21 +0200)]
[PHYLO.API] Adding REST functions.

5 years ago[MERGE] Fix warnings.
Alexandre Delanoë [Fri, 5 Apr 2019 13:10:54 +0000 (15:10 +0200)]
[MERGE] Fix warnings.

5 years ago[Phylo][Merge] Fix warnings and adding Eq instance to Phylo for Behavior test.
Alexandre Delanoë [Fri, 5 Apr 2019 11:55:09 +0000 (13:55 +0200)]
[Phylo][Merge] Fix warnings and adding Eq instance to Phylo for Behavior test.

5 years agoadd the mecanisms for filtering the FIS if needed
qlobbe [Thu, 4 Apr 2019 13:20:12 +0000 (15:20 +0200)]
add the mecanisms for filtering the FIS if needed

5 years agoadd the phylopeaks and correct some bugs on the phylodocs
qlobbe [Wed, 3 Apr 2019 14:52:50 +0000 (16:52 +0200)]
add the phylopeaks and correct some bugs on the phylodocs

5 years agoworking on phyloPeaks
qlobbe [Tue, 2 Apr 2019 17:20:51 +0000 (19:20 +0200)]
working on phyloPeaks

5 years agoAdd the PhyloParam to the Phylo constructor
qlobbe [Tue, 2 Apr 2019 10:21:41 +0000 (12:21 +0200)]
Add the PhyloParam to the Phylo constructor

5 years agoAdd new types for Cluster, Proximity, Filter, etc
qlobbe [Mon, 1 Apr 2019 15:23:47 +0000 (17:23 +0200)]
Add new types for Cluster, Proximity, Filter, etc

5 years agorefactoring Phylo.hs
qlobbe [Fri, 29 Mar 2019 15:05:11 +0000 (16:05 +0100)]
refactoring Phylo.hs

5 years agoadd a toPhylo function and the foundation of the Rest routes
qlobbe [Thu, 28 Mar 2019 14:00:09 +0000 (15:00 +0100)]
add a toPhylo function and the foundation of the Rest routes

5 years agoadd the view maker system
qlobbe [Mon, 25 Mar 2019 16:23:27 +0000 (17:23 +0100)]
add the view maker system

5 years agoadd the Metrics and the Filters
qlobbe [Thu, 21 Mar 2019 16:42:57 +0000 (17:42 +0100)]
add the Metrics and the Filters

5 years agoStrating to add PhyloView and PhyloQuery
qlobbe [Wed, 20 Mar 2019 16:50:30 +0000 (17:50 +0100)]
Strating to add PhyloView and PhyloQuery

5 years agoAdd the new branches definition
qlobbe [Mon, 18 Mar 2019 17:03:54 +0000 (18:03 +0100)]
Add the new branches definition

5 years agoAdd the view types for exporting a phylo
qlobbe [Mon, 18 Mar 2019 09:53:21 +0000 (10:53 +0100)]
Add the view types for exporting a phylo

5 years agoMerge branch 'dev-phylo' of https://gitlab.iscpif.fr/gargantext/haskell-gargantext...
qlobbe [Fri, 15 Mar 2019 16:24:15 +0000 (17:24 +0100)]
Merge branch 'dev-phylo' of https://gitlab.iscpif.fr/gargantext/haskell-gargantext into dev-phylo

5 years agoadd the foundations to the phylo
qlobbe [Fri, 15 Mar 2019 16:22:52 +0000 (17:22 +0100)]
add the foundations to the phylo

5 years agoadding some view functions
qlobbe [Thu, 14 Mar 2019 12:34:51 +0000 (13:34 +0100)]
adding some view functions

5 years ago[PHYLO] cLouvain in IO Monad fix.
Alexandre Delanoë [Thu, 14 Mar 2019 12:19:46 +0000 (13:19 +0100)]
[PHYLO] cLouvain in IO Monad fix.

5 years agostarting working on output views
qlobbe [Wed, 13 Mar 2019 17:37:24 +0000 (18:37 +0100)]
starting working on output views

5 years agohard core refactoring
qlobbe [Tue, 12 Mar 2019 15:35:17 +0000 (16:35 +0100)]
hard core refactoring

5 years agoWhooo class types ...
qlobbe [Mon, 11 Mar 2019 17:17:13 +0000 (18:17 +0100)]
Whooo class types ...

5 years agorefactoring
qlobbe [Mon, 11 Mar 2019 11:41:07 +0000 (12:41 +0100)]
refactoring

5 years agoAdd the clustering up to level 2 and more
qlobbe [Fri, 8 Mar 2019 16:08:08 +0000 (17:08 +0100)]
Add the clustering up to level 2 and more

5 years agoAdd the first steps the clustering
qlobbe [Thu, 7 Mar 2019 16:38:13 +0000 (17:38 +0100)]
Add the first steps the clustering

5 years agoAdd the branches detection
qlobbe [Thu, 7 Mar 2019 11:06:45 +0000 (12:06 +0100)]
Add the branches detection

5 years agoAdd the branch detection with a bugg
qlobbe [Wed, 6 Mar 2019 17:02:27 +0000 (18:02 +0100)]
Add the branch detection with a bugg

5 years agoAdd the weightedLogJaccard function
qlobbe [Tue, 5 Mar 2019 16:23:41 +0000 (17:23 +0100)]
Add the weightedLogJaccard function

5 years agoAdd sub cooc matrix to each PhyloGroup of level 1 and more
qlobbe [Tue, 5 Mar 2019 14:07:44 +0000 (15:07 +0100)]
Add sub cooc matrix to each PhyloGroup of level 1 and more

5 years agoAdd all the matching Childs/Parents mecanism
qlobbe [Mon, 4 Mar 2019 17:00:33 +0000 (18:00 +0100)]
Add all the matching Childs/Parents mecanism

5 years agoBegining of the Pair step
qlobbe [Fri, 1 Mar 2019 14:22:40 +0000 (15:22 +0100)]
Begining of the Pair step

5 years agoEnd of refactoring, put some function inside Tools.hs
qlobbe [Fri, 1 Mar 2019 10:58:42 +0000 (11:58 +0100)]
End of refactoring, put some function inside Tools.hs

5 years agoMore refactoring
qlobbe [Thu, 28 Feb 2019 16:11:01 +0000 (17:11 +0100)]
More refactoring

5 years agoSome refactoring
qlobbe [Wed, 27 Feb 2019 16:31:40 +0000 (17:31 +0100)]
Some refactoring

5 years ago[PHYLO] Code Review + Tools start.
Alexandre Delanoë [Wed, 27 Feb 2019 13:33:30 +0000 (14:33 +0100)]
[PHYLO] Code Review + Tools start.

5 years ago[Phylo] Reading cosmetics / New Tools file.
Alexandre Delanoë [Wed, 27 Feb 2019 12:59:46 +0000 (13:59 +0100)]
[Phylo] Reading cosmetics / New Tools file.

5 years agoAdd cooc matrix out of Fis
qlobbe [Wed, 27 Feb 2019 11:31:03 +0000 (12:31 +0100)]
Add cooc matrix out of Fis

5 years agoAdd field groupQuality to the phylo & a nonempty filter by support
qlobbe [Mon, 25 Feb 2019 14:30:48 +0000 (15:30 +0100)]
Add field groupQuality to the phylo & a nonempty filter by support

5 years agoAdd Fis filters & Fis to level 1 & level 1's links to level 0
qlobbe [Fri, 22 Feb 2019 15:44:18 +0000 (16:44 +0100)]
Add Fis filters & Fis to level 1 & level 1's links to level 0

5 years agoRefactor links 0 to -1 and -1 to 0 with lenses
qlobbe [Thu, 21 Feb 2019 13:20:04 +0000 (14:20 +0100)]
Refactor links 0 to -1 and -1 to 0 with lenses

5 years agoTry to build links from -1 to 0
qlobbe [Wed, 20 Feb 2019 16:54:00 +0000 (17:54 +0100)]
Try to build links from -1 to 0

5 years agoRefactor level -1 and 0 and start linking -1 to 0
qlobbe [Tue, 19 Feb 2019 16:36:42 +0000 (17:36 +0100)]
Refactor level -1 and 0 and start linking -1 to 0

5 years ago[Code Review] Morning Code Quentin and Alexandre.
Alexandre Delanoë [Tue, 19 Feb 2019 10:26:01 +0000 (11:26 +0100)]
[Code Review] Morning Code Quentin and Alexandre.

5 years agoadd phyloLevel -1 & 0
qlobbe [Mon, 18 Feb 2019 16:50:23 +0000 (17:50 +0100)]
add phyloLevel -1 & 0

5 years agoharmonized functions and types
qlobbe [Fri, 15 Feb 2019 17:28:11 +0000 (18:28 +0100)]
harmonized functions and types

5 years agoadd types Fis, Clique and Support
qlobbe [Fri, 15 Feb 2019 09:56:45 +0000 (10:56 +0100)]
add types Fis, Clique and Support

5 years agonew type for phylo
qlobbe [Fri, 8 Feb 2019 13:40:33 +0000 (14:40 +0100)]
new type for phylo

5 years agoadd the foundations to the phylo
qlobbe [Fri, 15 Mar 2019 16:22:52 +0000 (17:22 +0100)]
add the foundations to the phylo

5 years agoMerge branch 'dev-phylo' of https://gitlab.iscpif.fr/gargantext/haskell-gargantext...
qlobbe [Thu, 14 Mar 2019 12:35:00 +0000 (13:35 +0100)]
Merge branch 'dev-phylo' of https://gitlab.iscpif.fr/gargantext/haskell-gargantext into dev-phylo

5 years agoadding some view functions
qlobbe [Thu, 14 Mar 2019 12:34:51 +0000 (13:34 +0100)]
adding some view functions

5 years ago[PHYLO] cLouvain in IO Monad fix.
Alexandre Delanoë [Thu, 14 Mar 2019 12:19:46 +0000 (13:19 +0100)]
[PHYLO] cLouvain in IO Monad fix.

5 years agostarting working on output views
qlobbe [Wed, 13 Mar 2019 17:37:24 +0000 (18:37 +0100)]
starting working on output views

5 years agohard core refactoring
qlobbe [Tue, 12 Mar 2019 15:35:17 +0000 (16:35 +0100)]
hard core refactoring

5 years agoWhooo class types ...
qlobbe [Mon, 11 Mar 2019 17:17:13 +0000 (18:17 +0100)]
Whooo class types ...

5 years agorefactoring
qlobbe [Mon, 11 Mar 2019 11:41:07 +0000 (12:41 +0100)]
refactoring

5 years agoAdd the clustering up to level 2 and more
qlobbe [Fri, 8 Mar 2019 16:08:08 +0000 (17:08 +0100)]
Add the clustering up to level 2 and more

5 years agoAdd the first steps the clustering
qlobbe [Thu, 7 Mar 2019 16:38:13 +0000 (17:38 +0100)]
Add the first steps the clustering

5 years agoAdd the branches detection
qlobbe [Thu, 7 Mar 2019 11:06:45 +0000 (12:06 +0100)]
Add the branches detection

5 years agoAdd the branch detection with a bugg
qlobbe [Wed, 6 Mar 2019 17:02:27 +0000 (18:02 +0100)]
Add the branch detection with a bugg

5 years agoAdd the weightedLogJaccard function
qlobbe [Tue, 5 Mar 2019 16:23:41 +0000 (17:23 +0100)]
Add the weightedLogJaccard function

5 years agoAdd sub cooc matrix to each PhyloGroup of level 1 and more
qlobbe [Tue, 5 Mar 2019 14:07:44 +0000 (15:07 +0100)]
Add sub cooc matrix to each PhyloGroup of level 1 and more

5 years agoAdd all the matching Childs/Parents mecanism
qlobbe [Mon, 4 Mar 2019 17:00:33 +0000 (18:00 +0100)]
Add all the matching Childs/Parents mecanism

5 years agoBegining of the Pair step
qlobbe [Fri, 1 Mar 2019 14:22:40 +0000 (15:22 +0100)]
Begining of the Pair step

5 years agoEnd of refactoring, put some function inside Tools.hs
qlobbe [Fri, 1 Mar 2019 10:58:42 +0000 (11:58 +0100)]
End of refactoring, put some function inside Tools.hs

5 years agoMore refactoring
qlobbe [Thu, 28 Feb 2019 16:11:01 +0000 (17:11 +0100)]
More refactoring

5 years agoSome refactoring
qlobbe [Wed, 27 Feb 2019 16:31:40 +0000 (17:31 +0100)]
Some refactoring

5 years ago[PHYLO] Code Review + Tools start.
Alexandre Delanoë [Wed, 27 Feb 2019 13:33:30 +0000 (14:33 +0100)]
[PHYLO] Code Review + Tools start.

5 years ago[Phylo] Reading cosmetics / New Tools file.
Alexandre Delanoë [Wed, 27 Feb 2019 12:59:46 +0000 (13:59 +0100)]
[Phylo] Reading cosmetics / New Tools file.

5 years agoAdd cooc matrix out of Fis
qlobbe [Wed, 27 Feb 2019 11:31:03 +0000 (12:31 +0100)]
Add cooc matrix out of Fis

5 years agoAdd field groupQuality to the phylo & a nonempty filter by support
qlobbe [Mon, 25 Feb 2019 14:30:48 +0000 (15:30 +0100)]
Add field groupQuality to the phylo & a nonempty filter by support

5 years agoAdd Fis filters & Fis to level 1 & level 1's links to level 0
qlobbe [Fri, 22 Feb 2019 15:44:18 +0000 (16:44 +0100)]
Add Fis filters & Fis to level 1 & level 1's links to level 0

5 years agoRefactor links 0 to -1 and -1 to 0 with lenses
qlobbe [Thu, 21 Feb 2019 13:20:04 +0000 (14:20 +0100)]
Refactor links 0 to -1 and -1 to 0 with lenses

5 years agoTry to build links from -1 to 0
qlobbe [Wed, 20 Feb 2019 16:54:00 +0000 (17:54 +0100)]
Try to build links from -1 to 0

5 years agoRefactor level -1 and 0 and start linking -1 to 0
qlobbe [Tue, 19 Feb 2019 16:36:42 +0000 (17:36 +0100)]
Refactor level -1 and 0 and start linking -1 to 0

5 years ago[Code Review] Morning Code Quentin and Alexandre.
Alexandre Delanoë [Tue, 19 Feb 2019 10:26:01 +0000 (11:26 +0100)]
[Code Review] Morning Code Quentin and Alexandre.

5 years agoadd phyloLevel -1 & 0
qlobbe [Mon, 18 Feb 2019 16:50:23 +0000 (17:50 +0100)]
add phyloLevel -1 & 0

5 years agoharmonized functions and types
qlobbe [Fri, 15 Feb 2019 17:28:11 +0000 (18:28 +0100)]
harmonized functions and types

5 years agoMerge branch 'dev' into dev-phylo
qlobbe [Fri, 15 Feb 2019 10:02:54 +0000 (11:02 +0100)]
Merge branch 'dev' into dev-phylo

5 years agoadd types Fis, Clique and Support
qlobbe [Fri, 15 Feb 2019 09:56:45 +0000 (10:56 +0100)]
add types Fis, Clique and Support

5 years ago[DOC] Types for Phylo.
Alexandre Delanoë [Fri, 15 Feb 2019 09:01:23 +0000 (10:01 +0100)]
[DOC] Types for Phylo.

5 years ago[Notes MEETING] Phylomemy work with Quentin and David.
Alexandre Delanoë [Fri, 15 Feb 2019 08:55:08 +0000 (09:55 +0100)]
[Notes MEETING] Phylomemy work with Quentin and David.

5 years ago[FIX] Get default lists of userMaster.
Alexandre Delanoë [Fri, 15 Feb 2019 08:11:54 +0000 (09:11 +0100)]
[FIX] Get default lists of userMaster.