tests/Phylomemy/TemporalMatchingSpec/dotMaximalSpanningTrees/docs=docs0.minSupp=1.minSize=2.lambda=0.30.golden

   1 // fromList [(Pos 1,[1,2,5]),(Pos 2,[1,3,5]),(Pos 3,[3,4]),(Pos 4,[1,5]),(Pos 5,[1,3,4,6]),(Pos 6,[2,5,7,8])]
   2 digraph g
   3 {
   4   splines="ortho"
   5   subgraph cluster_r1
   6   {
   7     // Create a node for the range r1
   8     r1[shape=box,label="1",color=gray,style=filled,fillcolor=gray]
   9     color=gray
  10     {
  11       rank=same
  12       // Create the cluster nodes within the range r1
  13       r1t1c1[label="a & d & e
  14 T001
  15 0.67",style=filled,fillcolor=7,colorscheme=ylorrd9,shape=box]
  16       r1t2c1[label="e & f & g
  17 T002
  18 0.67",style=filled,fillcolor=7,colorscheme=ylorrd9,shape=box]
  19       r1t5c1[label="a & b & c
  20 T005
  21 0.67",style=filled,fillcolor=7,colorscheme=ylorrd9,shape=box]
  22       // Horizontally align the cluster nodes within the same range
  23       r1 -> r1t1c1[style=invis]
  24       r1t1c1 -> r1t2c1[weight=10,style=invis]
  25       r1t2c1 -> r1t5c1[weight=10,style=invis]
  26     }
  27   }
  28   subgraph cluster_r2
  29   {
  30     // Create a node for the range r2
  31     r2[shape=box,label="2",color=gray,style=filled,fillcolor=gray]
  32     color=gray
  33     {
  34       rank=same
  35       // Create the cluster nodes within the range r2
  36       r2t1c1[label="a & d
  37 T001
  38 0.67",style=filled,fillcolor=7,colorscheme=ylorrd9,shape=box]
  39       r2t3c1[label="d & f
  40 T003
  41 0.67",style=filled,fillcolor=7,colorscheme=ylorrd9,shape=box]
  42       r2t5c1[label="a & b
  43 T005
  44 0.67",style=filled,fillcolor=7,colorscheme=ylorrd9,shape=box]
  45       // Horizontally align the cluster nodes within the same range
  46       r2 -> r2t1c1[style=invis]
  47       r2t1c1 -> r2t3c1[weight=10,style=invis]
  48       r2t3c1 -> r2t5c1[weight=10,style=invis]
  49     }
  50   }
  51   subgraph cluster_r3
  52   {
  53     // Create a node for the range r3
  54     r3[shape=box,label="3",color=gray,style=filled,fillcolor=gray]
  55     color=gray
  56     {
  57       rank=same
  58       // Create the cluster nodes within the range r3
  59       r3t3c1[label="d & f
  60 T003
  61 0.67",style=filled,fillcolor=7,colorscheme=ylorrd9,shape=box]
  62       r3t4c1[label="a & f & g
  63 T004
  64 0.67",style=filled,fillcolor=7,colorscheme=ylorrd9,shape=box]
  65       // Horizontally align the cluster nodes within the same range
  66       r3 -> r3t3c1[style=invis]
  67       r3t3c1 -> r3t4c1[weight=10,style=invis]
  68     }
  69   }
  70   subgraph cluster_r4
  71   {
  72     // Create a node for the range r4
  73     r4[shape=box,label="4",color=gray,style=filled,fillcolor=gray]
  74     color=gray
  75     {
  76       rank=same
  77       // Create the cluster nodes within the range r4
  78       r4t1c1[label="a & d & e
  79 T001
  80 0.67",style=filled,fillcolor=7,colorscheme=ylorrd9,shape=box]
  81       r4t5c1[label="a & b & c
  82 T005
  83 0.67",style=filled,fillcolor=7,colorscheme=ylorrd9,shape=box]
  84       r4t5c2[label="b & c
  85 T005
  86 0.67",style=filled,fillcolor=7,colorscheme=ylorrd9,shape=box]
  87       r4t5c3[label="b & c & e
  88 T005
  89 0.67",style=filled,fillcolor=7,colorscheme=ylorrd9,shape=box]
  90       // Horizontally align the cluster nodes within the same range
  91       r4 -> r4t1c1[style=invis]
  92       r4t1c1 -> r4t5c1[weight=10,style=invis]
  93       r4t5c1 -> r4t5c2[weight=10,style=invis]
  94       r4t5c2 -> r4t5c3[weight=10,style=invis]
  95     }
  96   }
  97   subgraph cluster_r5
  98   {
  99     // Create a node for the range r5
 100     r5[shape=box,label="5",color=gray,style=filled,fillcolor=gray]
 101     color=gray
 102     {
 103       rank=same
 104       // Create the cluster nodes within the range r5
 105       r5t1c1[label="a & c & d
 106 T001
 107 0.67",style=filled,fillcolor=7,colorscheme=ylorrd9,shape=box]
 108       r5t3c1[label="d & f & g
 109 T003
 110 0.67",style=filled,fillcolor=7,colorscheme=ylorrd9,shape=box]
 111       r5t4c1[label="a & f
 112 T004
 113 0.67",style=filled,fillcolor=7,colorscheme=ylorrd9,shape=box]
 114       r5t6c1[label="b & f
 115 T006",style=filled,colorscheme=ylorrd9,shape=box]
 116       // Horizontally align the cluster nodes within the same range
 117       r5 -> r5t1c1[style=invis]
 118       r5t1c1 -> r5t3c1[weight=10,style=invis]
 119       r5t3c1 -> r5t4c1[weight=10,style=invis]
 120       r5t4c1 -> r5t6c1[weight=10,style=invis]
 121     }
 122   }
 123   subgraph cluster_r6
 124   {
 125     // Create a node for the range r6
 126     r6[shape=box,label="6",color=gray,style=filled,fillcolor=gray]
 127     color=gray
 128     {
 129       rank=same
 130       // Create the cluster nodes within the range r6
 131       r6t2c1[label="e & g
 132 T002
 133 0.67",style=filled,fillcolor=7,colorscheme=ylorrd9,shape=box]
 134       r6t5c1[label="a & b & c
 135 T005
 136 0.67",style=filled,fillcolor=7,colorscheme=ylorrd9,shape=box]
 137       r6t5c2[label="b & c
 138 T005
 139 0.67",style=filled,fillcolor=7,colorscheme=ylorrd9,shape=box]
 140       r6t5c3[label="b & c & g
 141 T005
 142 0.67",style=filled,fillcolor=7,colorscheme=ylorrd9,shape=box]
 143       r6t7c1[label="c & d & g
 144 T007",style=filled,colorscheme=ylorrd9,shape=box]
 145       r6t8c1[label="c & g
 146 T008",style=filled,colorscheme=ylorrd9,shape=box]
 147       // Horizontally align the cluster nodes within the same range
 148       r6 -> r6t2c1[style=invis]
 149       r6t2c1 -> r6t5c1[weight=10,style=invis]
 150       r6t5c1 -> r6t5c2[weight=10,style=invis]
 151       r6t5c2 -> r6t5c3[weight=10,style=invis]
 152       r6t5c3 -> r6t7c1[weight=10,style=invis]
 153       r6t7c1 -> r6t8c1[weight=10,style=invis]
 154     }
 155   }
 156   // Create the edges of the MST 1
 157   r1t1c1 -> r5t1c1[constraint=false,color=6,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 158   r1t1c1 -> r2t1c1[constraint=false,color=6,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 159   r1t1c1 -> r4t1c1[constraint=false,color=0,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 160   // Create the edges of the MST 2
 161   r1t2c1 -> r6t2c1[constraint=false,color=6,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 162   // Create the edges of the MST 3
 163   r2t3c1 -> r5t3c1[constraint=false,color=6,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 164   r2t3c1 -> r3t3c1[constraint=false,color=0,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 165   // Create the edges of the MST 4
 166   r3t4c1 -> r5t4c1[constraint=false,color=6,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 167   // Create the edges of the MST 5
 168   r4t5c3 -> r1t5c1[constraint=false,color=6,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 169   r1t5c1 -> r6t5c3[constraint=false,color=6,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 170   r1t5c1 -> r4t5c2[constraint=false,color=6,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 171   r4t5c2 -> r6t5c2[constraint=false,color=0,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 172   r1t5c1 -> r2t5c1[constraint=false,color=6,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 173   r1t5c1 -> r6t5c1[constraint=false,color=0,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 174   r1t5c1 -> r4t5c1[constraint=false,color=0,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 175   // Create the edges of the MST 6
 176   // Create the edges of the MST 7
 177   // Create the edges of the MST 8
 178   // Vertically align range nodes
 179   r1 -> r2 -> r3 -> r4 -> r5 -> r6[weight=10,style=invis]
 180 }