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[PHYLO] fix parameters for conference Oslo.
[gargantext.git] / src / Gargantext / Database / Metrics.hs
1 {-|
2 Module : Gargantext.Database.Metrics
3 Description : Get Metrics from Storage (Database like)
4 Copyright : (c) CNRS, 2017-Present
5 License : AGPL + CECILL v3
6 Maintainer : team@gargantext.org
7 Stability : experimental
8 Portability : POSIX
9
10 Node API
11 -}
12
13
14 {-# LANGUAGE OverloadedStrings #-}
15 {-# LANGUAGE NoImplicitPrelude #-}
16 {-# LANGUAGE FlexibleContexts #-}
17
18 module Gargantext.Database.Metrics
19 where
20
21 import Data.Map (Map)
22 import Data.Text (Text)
23 import Gargantext.API.Ngrams (TabType(..), ngramsTypeFromTabType)
24 import Gargantext.API.Ngrams.Tools (filterListWithRoot, groupNodesByNgrams, Diagonal(..), getCoocByNgrams, mapTermListRoot, RootTerm)
25 import Gargantext.Core.Types (ListType(..), Limit, NodeType(..))
26 import Gargantext.Database.Flow (FlowCmdM)
27 import Gargantext.Database.Metrics.NgramsByNode (getNodesByNgramsOnlyUser{-, getTficfWith-})
28 import Gargantext.Database.Node.Select
29 import Gargantext.Database.Schema.Node (defaultList)
30 import Gargantext.Database.Types.Node (ListId, CorpusId{-, HyperdataCorpus-})
31 --import Gargantext.Database.Flow (getOrMkRootWithCorpus)
32 import Gargantext.Database.Config (userMaster)
33 import Gargantext.Prelude
34 import Gargantext.Text.Metrics (scored, Scored(..), {-localMetrics, toScored-})
35 import qualified Data.Map as Map
36 --import qualified Data.Vector.Storable as Vec
37
38
39 getMetrics :: FlowCmdM env err m
40 => CorpusId -> Maybe ListId -> TabType -> Maybe Limit
41 -> m (Map Text (ListType, Maybe Text), [Scored Text])
42 getMetrics cId maybeListId tabType maybeLimit = do
43 (ngs, _, myCooc) <- getNgramsCooc cId maybeListId tabType maybeLimit
44 pure (ngs, scored myCooc)
45
46
47 {- | TODO remove unused function
48 getMetrics :: FlowCmdM env err m
49 => CorpusId -> Maybe ListId -> TabType -> Maybe Limit
50 -> m (Map Text (ListType, Maybe Text), [Scored Text])
51 getMetrics cId maybeListId tabType maybeLimit = do
52 (ngs, ngs', metrics) <- getLocalMetrics cId maybeListId tabType maybeLimit
53
54 (_masterUserId, _masterRootId, masterCorpusId) <- getOrMkRootWithCorpus userMaster "" (Nothing :: Maybe HyperdataCorpus)
55
56 lId <- defaultList cId
57 lIds <- selectNodesWithUsername NodeList userMaster
58
59 metrics' <- getTficfWith cId masterCorpusId (lIds <> [lId]) (ngramsTypeFromTabType tabType) ngs'
60
61 pure (ngs , toScored [metrics, Map.fromList $ map (\(a,b) -> (a, Vec.fromList [fst b])) $ Map.toList metrics'])
62
63 getLocalMetrics :: (FlowCmdM env err m)
64 => CorpusId -> Maybe ListId -> TabType -> Maybe Limit
65 -> m ( Map Text (ListType, Maybe Text)
66 , Map Text (Maybe RootTerm)
67 , Map Text (Vec.Vector Double)
68 )
69 getLocalMetrics cId maybeListId tabType maybeLimit = do
70 (ngs, ngs', myCooc) <- getNgramsCooc cId maybeListId tabType maybeLimit
71 pure (ngs, ngs', localMetrics myCooc)
72 -}
73
74
75 getNgramsCooc :: (FlowCmdM env err m)
76 => CorpusId -> Maybe ListId -> TabType -> Maybe Limit
77 -> m ( Map Text (ListType, Maybe Text)
78 , Map Text (Maybe RootTerm)
79 , Map (Text, Text) Int
80 )
81 getNgramsCooc cId maybeListId tabType maybeLimit = do
82 (ngs', ngs) <- getNgrams cId maybeListId tabType
83
84 let
85 take' Nothing xs = xs
86 take' (Just n) xs = take n xs
87
88 lId <- defaultList cId
89 lIds <- selectNodesWithUsername NodeList userMaster
90
91 myCooc <- Map.filter (>1) <$> getCoocByNgrams (Diagonal True)
92 <$> groupNodesByNgrams ngs
93 <$> getNodesByNgramsOnlyUser cId (lIds <> [lId]) (ngramsTypeFromTabType tabType)
94 (take' maybeLimit $ Map.keys ngs)
95 pure $ (ngs', ngs, myCooc)
96
97
98
99 getNgrams :: (FlowCmdM env err m)
100 => CorpusId -> Maybe ListId -> TabType
101 -> m (Map Text (ListType, Maybe Text), Map Text (Maybe RootTerm))
102 getNgrams cId maybeListId tabType = do
103 lId <- case maybeListId of
104 Nothing -> defaultList cId
105 Just lId' -> pure lId'
106
107 lists <- mapTermListRoot [lId] (ngramsTypeFromTabType tabType)
108 let maybeSyn = Map.unions $ map (\t -> filterListWithRoot t lists)
109 [GraphTerm, StopTerm, CandidateTerm]
110 pure (lists, maybeSyn)
111