2 Module : Gargantext.Viz.Phylo.Tools
3 Description : Phylomemy Tools to build/manage it
4 Copyright : (c) CNRS, 2017-Present
5 License : AGPL + CECILL v3
6 Maintainer : team@gargantext.org
7 Stability : experimental
13 {-# OPTIONS_GHC -fno-warn-orphans #-}
15 {-# LANGUAGE FlexibleContexts #-}
16 {-# LANGUAGE FlexibleInstances #-}
17 {-# LANGUAGE RankNTypes #-}
18 {-# LANGUAGE NoImplicitPrelude #-}
19 {-# LANGUAGE OverloadedStrings #-} -- allows to write Text literals
20 {-# LANGUAGE OverloadedLists #-} -- allows to write Map and HashMap as lists
21 {-# LANGUAGE DataKinds #-}
22 {-# LANGUAGE TypeOperators #-}
24 module Gargantext.Viz.Graph.API
27 import Debug.Trace (trace)
28 import Control.Concurrent -- (forkIO)
29 import Control.Lens (set, (^.), _Just, (^?))
30 import Control.Monad.IO.Class (liftIO)
31 import Data.Maybe (Maybe(..))
32 import Gargantext.API.Ngrams (NgramsRepo, r_version)
33 import Gargantext.API.Ngrams.Tools
34 import Gargantext.API.Types
35 import Gargantext.Core.Types.Main
36 import Gargantext.Database.Config
37 import Gargantext.Database.Metrics.NgramsByNode (getNodesByNgramsOnlyUser)
38 import Gargantext.Database.Schema.Ngrams
39 import Gargantext.Database.Node.Select
40 import Gargantext.Database.Schema.Node (getNodeWith, getNodeUser, defaultList, insertGraph, HasNodeError)
41 import Gargantext.Database.Types.Node hiding (node_id) -- (GraphId, ListId, CorpusId, NodeId)
42 import Gargantext.Database.Node.UpdateOpaleye (updateHyperdata)
43 import Gargantext.Database.Utils (Cmd)
44 import Gargantext.Prelude
45 import Gargantext.Viz.Graph
46 import Gargantext.Viz.Graph.Tools -- (cooc2graph)
49 import Gargantext.API.Orchestrator.Types
50 import Servant.Job.Types
51 import Servant.Job.Async
52 import qualified Data.Map as Map
54 ------------------------------------------------------------------------
56 -- | There is no Delete specific API for Graph since it can be deleted
58 type GraphAPI = Get '[JSON] Graph
59 :<|> Post '[JSON] [GraphId]
64 graphAPI :: UserId -> NodeId -> GargServer GraphAPI
65 graphAPI u n = getGraph u n
70 ------------------------------------------------------------------------
72 {- Model to fork Graph Computation
73 -- This is not really optimized since it increases the need RAM
74 -- and freezes the whole system
75 -- This is mainly for documentation (see a better solution in the function below)
76 -- Each process has to be tailored
77 getGraph' :: UserId -> NodeId -> GargServer (Get '[JSON] Graph)
79 newGraph <- liftIO newEmptyMVar
81 _ <- liftIO $ forkIO $ putMVar newGraph g
82 g' <- liftIO $ takeMVar newGraph
85 getGraph :: UserId -> NodeId -> GargNoServer Graph
87 nodeGraph <- getNodeWith nId HyperdataGraph
88 let graph = nodeGraph ^. node_hyperdata . hyperdataGraph
89 let listVersion = graph ^? _Just
96 let v = repo ^. r_version
97 nodeUser <- getNodeUser (NodeId uId)
99 let uId' = nodeUser ^. node_userId
101 let cId = maybe (panic "[ERR:G.V.G.API] Node has no parent")
103 $ nodeGraph ^. node_parentId
107 graph' <- computeGraph cId NgramsTerms repo
108 _ <- insertGraph cId uId' (HyperdataGraph $ Just graph')
111 Just graph' -> if listVersion == Just v
114 graph'' <- computeGraph cId NgramsTerms repo
115 _ <- updateHyperdata nId (HyperdataGraph $ Just graph'')
118 newGraph <- liftIO newEmptyMVar
119 _ <- liftIO $ forkIO $ putMVar newGraph g
120 g' <- liftIO $ takeMVar newGraph
121 pure {- $ trace (show g) $ -} g'
124 -- TODO use Database Monad only here ?
125 computeGraph :: HasNodeError err => CorpusId -> NgramsType -> NgramsRepo -> Cmd err Graph
126 computeGraph cId nt repo = do
127 lId <- defaultList cId
129 let metadata = GraphMetadata "Title" [cId]
130 [ LegendField 1 "#FFF" "Cluster"
131 , LegendField 2 "#FFF" "Cluster"
133 (ListForGraph lId (repo ^. r_version))
134 -- (map (\n -> LegendField n "#FFFFFF" (pack $ show n)) [1..10])
136 lIds <- selectNodesWithUsername NodeList userMaster
137 let ngs = filterListWithRoot GraphTerm $ mapTermListRoot [lId] nt repo
139 myCooc <- inMVarIO $ Map.filter (>1)
140 <$> getCoocByNgrams (Diagonal False)
141 <$> groupNodesByNgrams ngs
142 <$> getNodesByNgramsOnlyUser cId (lIds <> [lId]) nt (Map.keys ngs)
144 graph <- liftIO $ inMVar $ cooc2graph 0 myCooc
145 let graph' = set graph_metadata (Just metadata) graph
150 postGraph :: NodeId -> GargServer (Post '[JSON] [NodeId])
151 postGraph = undefined
153 putGraph :: NodeId -> GargServer (Put '[JSON] Int)
156 ------------------------------------------------------------
158 type GraphAsync = Summary "Update graph"
160 :> AsyncJobsAPI ScraperStatus () ScraperStatus
162 graphAsync :: UserId -> NodeId -> GargServer GraphAsync
165 JobFunction (\_ log' -> graphAsync' u n (liftIO . log'))
168 graphAsync' :: UserId
170 -> (ScraperStatus -> GargNoServer ())
171 -> GargNoServer ScraperStatus
172 graphAsync' u n logStatus = do
173 logStatus ScraperStatus { _scst_succeeded = Just 1
174 , _scst_failed = Just 0
175 , _scst_remaining = Just 1
176 , _scst_events = Just []
178 _g <- trace (show u) $ getGraph u n
179 pure ScraperStatus { _scst_succeeded = Just 1
180 , _scst_failed = Just 0
181 , _scst_remaining = Just 1
182 , _scst_events = Just []