]> Git — Sourcephile - gargantext.git/blob - src/Gargantext/API/Node/Corpus/Searx.hs
[pubmed] some work towards pubmed api key
[gargantext.git] / src / Gargantext / API / Node / Corpus / Searx.hs
1 {-# LANGUAGE TemplateHaskell #-}
2
3 module Gargantext.API.Node.Corpus.Searx where
4
5
6
7 import Control.Lens (view)
8 import qualified Data.Aeson as Aeson
9 import Data.Aeson.TH (deriveJSON)
10 import Data.Either (Either(..))
11 import qualified Data.HashMap.Strict as HashMap
12 import qualified Data.Text as T
13 import Data.Time.Calendar (Day, toGregorian)
14 import Data.Time.Format (defaultTimeLocale, formatTime, parseTimeM)
15 import Data.Tuple.Select (sel1, sel2, sel3)
16 import GHC.Generics (Generic)
17 import Network.HTTP.Client
18 import Network.HTTP.Client.TLS
19
20 import qualified Prelude
21 import Protolude (catMaybes, encodeUtf8, rightToMaybe, Text)
22 import Gargantext.Prelude
23 import Gargantext.Prelude.Config
24
25 import Gargantext.API.Admin.Orchestrator.Types (JobLog(..))
26 --import Gargantext.API.Admin.Types (HasSettings)
27 import Gargantext.API.Job (jobLogSuccess)
28 import Gargantext.Core (Lang(..), PosTagAlgo(..))
29 import qualified Gargantext.Core.Text.Corpus.API as API
30 import Gargantext.Core.Text.List (buildNgramsLists)
31 import Gargantext.Core.Text.List.Group.WithStem ({-StopSize(..),-} GroupParams(..))
32 import Gargantext.Core.Text.Terms (TermType(..))
33 import Gargantext.Core.Types.Individu (User(..))
34 import Gargantext.Core.Utils.Prefix (unPrefix)
35 import Gargantext.Database.Action.Flow (insertMasterDocs) --, DataText(..))
36 import Gargantext.Database.Action.Flow.List (flowList_DbRepo)
37 import Gargantext.Database.Action.Flow.Types (FlowCmdM)
38 import Gargantext.Database.Action.User (getUserId)
39 import Gargantext.Database.Admin.Config (userMaster)
40 import Gargantext.Database.Admin.Types.Hyperdata.Corpus (HyperdataCorpus)
41 import Gargantext.Database.Admin.Types.Hyperdata.Document (HyperdataDocument(..))
42 import Gargantext.Database.Admin.Types.Node (CorpusId, ListId)
43 import Gargantext.Database.Prelude (hasConfig)
44 import Gargantext.Database.Query.Table.Node (defaultListMaybe, getOrMkList)
45 import Gargantext.Database.Query.Tree.Root (getOrMk_RootWithCorpus)
46 import qualified Gargantext.Database.Query.Table.Node.Document.Add as Doc (add)
47
48 langToSearx :: Lang -> Text
49 langToSearx EN = "en-US"
50 langToSearx FR = "fr-FR"
51 langToSearx All = "en-US"
52
53 data SearxResult = SearxResult
54 { _sr_url :: Text
55 , _sr_title :: Text
56 , _sr_content :: Maybe Text
57 , _sr_engine :: Text
58 , _sr_score :: Double
59 , _sr_category :: Text
60 , _sr_pretty_url :: Text
61 , _sr_publishedDate :: Text -- "Nov 19, 2021"
62 , _sr_pubdate :: Text -- "2021-11-19 02:12:00+0000"
63 }
64 deriving (Show, Eq, Generic)
65 -- , _sr_parsed_url
66 -- , _sr_engines
67 -- , _sr_positions
68
69 $(deriveJSON (unPrefix "_sr_") ''SearxResult)
70
71 data SearxResponse = SearxResponse
72 { _srs_query :: Text
73 , _srs_number_of_results :: Int
74 , _srs_results :: [SearxResult] }
75 deriving (Show, Eq, Generic)
76 -- , _srs_answers
77 -- , _srs_corrections
78 -- , _srs_infoboxes
79 -- , _srs_suggestions :: [Text]
80 -- , _srs_unresponsive_engines :: [Text] }
81
82 $(deriveJSON (unPrefix "_srs_") ''SearxResponse)
83
84 data FetchSearxParams = FetchSearxParams
85 { _fsp_language :: Lang
86 , _fsp_manager :: Manager
87 , _fsp_pageno :: Int
88 , _fsp_query :: Text
89 , _fsp_url :: Text
90 }
91
92 fetchSearxPage :: FetchSearxParams -> IO (Either Prelude.String SearxResponse)
93 fetchSearxPage (FetchSearxParams { _fsp_language
94 , _fsp_manager
95 , _fsp_pageno
96 , _fsp_query
97 , _fsp_url }) = do
98 -- searx search API:
99 -- https://searx.github.io/searx/dev/search_api.html?highlight=json
100 req <- parseRequest $ T.unpack _fsp_url
101 let request = urlEncodedBody
102 [ --("category_general", "1")
103 ("q", encodeUtf8 _fsp_query)
104 , ("categories", "news") -- https://gitlab.iscpif.fr/gargantext/haskell-gargantext/issues/70#note_3976
105 , ("pageno", encodeUtf8 $ T.pack $ show _fsp_pageno)
106 --, ("time_range", "None")
107 , ("language", encodeUtf8 $ langToSearx _fsp_language)
108 , ("format", "json")
109 ] req
110 res <- httpLbs request _fsp_manager
111 let dec = Aeson.eitherDecode $ responseBody res :: (Either Prelude.String SearxResponse)
112 pure dec
113
114 insertSearxResponse :: (MonadBase IO m, FlowCmdM env err m)
115 => User
116 -> CorpusId
117 -> ListId
118 -> Lang
119 -> Either Prelude.String SearxResponse
120 -> m ()
121 insertSearxResponse _ _ _ _ (Left _) = pure ()
122 insertSearxResponse user cId listId l (Right (SearxResponse { _srs_results })) = do
123 let docs = hyperdataDocumentFromSearxResult l <$> _srs_results
124 --printDebug "[triggerSearxSearch] docs" docs
125 -- docs :: [Either Text HyperdataDocument]
126 let docs' = catMaybes $ rightToMaybe <$> docs
127 Prelude.mapM_ (\(HyperdataDocument { _hd_title, _hd_publication_year, _hd_publication_date }) -> do
128 printDebug "[triggerSearxSearch] doc time" $
129 "[title] " <> (show _hd_title) <>
130 " :: [publication_year] " <> (show _hd_publication_year) <>
131 " :: [publication_date] " <> (show _hd_publication_date)
132 ) docs'
133 --_ <- flowDataText user (DataNew [docs']) (Multi l) cId Nothing logStatus
134 let mCorpus = Nothing :: Maybe HyperdataCorpus
135 ids <- insertMasterDocs mCorpus (Multi l) docs'
136 _ <- Doc.add cId ids
137 (_masterUserId, _masterRootId, masterCorpusId)
138 <- getOrMk_RootWithCorpus (UserName userMaster) (Left "") mCorpus
139 let
140 gp = case l of
141 FR -> GroupWithPosTag l Spacy HashMap.empty
142 _ -> GroupWithPosTag l CoreNLP HashMap.empty
143 ngs <- buildNgramsLists user cId masterCorpusId Nothing gp
144 _userListId <- flowList_DbRepo listId ngs
145
146 pure ()
147
148 -- TODO Make an async task out of this?
149 triggerSearxSearch :: (MonadBase IO m, FlowCmdM env err m)
150 => User
151 -> CorpusId
152 -> API.Query
153 -> Lang
154 -> (JobLog -> m ())
155 -> m JobLog
156 triggerSearxSearch user cId q l logStatus = do
157 let numPages = 100
158 let jobLog = JobLog { _scst_succeeded = Just 0
159 , _scst_failed = Just 0
160 , _scst_remaining = Just numPages
161 , _scst_events = Just []
162 }
163 logStatus jobLog
164
165 printDebug "[triggerSearxSearch] cId" cId
166 printDebug "[triggerSearxSearch] q" q
167 printDebug "[triggerSearxSearch] l" l
168 cfg <- view hasConfig
169 uId <- getUserId user
170 let surl = _gc_frame_searx_url cfg
171 printDebug "[triggerSearxSearch] surl" surl
172 mListId <- defaultListMaybe cId
173 listId <- case mListId of
174 Nothing -> do
175 listId <- getOrMkList cId uId
176 pure listId
177 Just listId -> pure listId
178
179 printDebug "[triggerSearxSearch] listId" listId
180
181 manager <- liftBase $ newManager tlsManagerSettings
182 _ <- mapM (\page -> do
183 res <- liftBase $ fetchSearxPage $ FetchSearxParams { _fsp_language = l
184 , _fsp_manager = manager
185 , _fsp_pageno = page
186 , _fsp_query = q
187 , _fsp_url = surl }
188
189 insertSearxResponse user cId listId l res
190
191 logStatus $ JobLog { _scst_succeeded = Just page
192 , _scst_failed = Just 0
193 , _scst_remaining = Just (numPages - page)
194 , _scst_events = Just [] }
195 ) [1..numPages]
196 --printDebug "[triggerSearxSearch] res" res
197
198 pure $ jobLogSuccess jobLog
199
200 hyperdataDocumentFromSearxResult :: Lang -> SearxResult -> Either T.Text HyperdataDocument
201 hyperdataDocumentFromSearxResult l (SearxResult { _sr_content, _sr_engine, _sr_pubdate, _sr_title }) = do
202 let mDate = parseTimeM False defaultTimeLocale "%Y-%m-%d %H:%M:%S+0000" (T.unpack _sr_pubdate) :: Maybe Day
203 let mGregorian = toGregorian <$> mDate
204 Right HyperdataDocument { _hd_bdd = Just "Searx"
205 , _hd_doi = Nothing
206 , _hd_url = Nothing
207 , _hd_uniqId = Nothing
208 , _hd_uniqIdBdd = Nothing
209 , _hd_page = Nothing
210 , _hd_title = Just _sr_title
211 , _hd_authors = Nothing
212 , _hd_institutes = Nothing
213 , _hd_source = Just _sr_engine
214 , _hd_abstract = _sr_content
215 , _hd_publication_date = T.pack <$> formatTime defaultTimeLocale "%Y-%m-%dT%H:%M:%S" <$> mDate
216 , _hd_publication_year = fromIntegral <$> sel1 <$> mGregorian
217 , _hd_publication_month = sel2 <$> mGregorian
218 , _hd_publication_day = sel3 <$> mGregorian
219 , _hd_publication_hour = Nothing
220 , _hd_publication_minute = Nothing
221 , _hd_publication_second = Nothing
222 , _hd_language_iso2 = Just $ T.pack $ show l }
223