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refactoring 2021, remove old phylo files, keep API
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1 {-|
2 Module : Gargantext.Database.Tree
3 Description : Tree of Resource Nodes built from Database
4 Copyright : (c) CNRS, 2017-Present
5 License : AGPL + CECILL v3
6 Maintainer : team@gargantext.org
7 Stability : experimental
8 Portability : POSIX
9
10 Let a Root Node, return the Tree of the Node as a directed acyclic graph
11 (Tree).
12
13 -- TODO delete node, if not owned, then suppress the link only
14 -- see Action/Delete.hs
15 -}
16
17 {-# LANGUAGE QuasiQuotes #-}
18 {-# LANGUAGE TemplateHaskell #-}
19
20 module Gargantext.Database.Query.Tree
21 ( module Gargantext.Database.Query.Tree.Error
22 , isDescendantOf
23 , isIn
24 , tree
25 , TreeMode(..)
26 , findNodesId
27 , DbTreeNode(..)
28 , dt_name
29 , dt_nodeId
30 , dt_typeId
31 , findShared
32 , findNodes
33 , NodeMode(..)
34 )
35 where
36
37 import Control.Lens ((^..), at, each, _Just, to, set, makeLenses)
38 import Control.Monad.Error.Class (MonadError())
39 import Data.List (tail, concat, nub)
40 import Data.Map (Map, fromListWith, lookup)
41 import Data.Text (Text)
42 import Database.PostgreSQL.Simple
43 import Database.PostgreSQL.Simple.SqlQQ
44 import Gargantext.Core.Types.Main (NodeTree(..), Tree(..))
45 import Gargantext.Database.Admin.Config (fromNodeTypeId, nodeTypeId, fromNodeTypeId)
46 import Gargantext.Database.Admin.Types.Node
47 import Gargantext.Database.Prelude (Cmd, runPGSQuery)
48 import Gargantext.Database.Query.Table.NodeNode (getNodeNode)
49 import Gargantext.Database.Query.Tree.Error
50 import Gargantext.Database.Schema.NodeNode (NodeNodePoly(..))
51 import Gargantext.Prelude
52
53 ------------------------------------------------------------------------
54 data DbTreeNode = DbTreeNode { _dt_nodeId :: NodeId
55 , _dt_typeId :: Int
56 , _dt_parentId :: Maybe NodeId
57 , _dt_name :: Text
58 } deriving (Show)
59
60 makeLenses ''DbTreeNode
61
62 instance Eq DbTreeNode where
63 (==) d1 d2 = (==) (_dt_nodeId d1) (_dt_nodeId d2)
64
65 ------------------------------------------------------------------------
66
67 data TreeMode = TreeBasic | TreeAdvanced
68
69 -- | Returns the Tree of Nodes in Database
70 tree :: HasTreeError err
71 => TreeMode
72 -> RootId
73 -> [NodeType]
74 -> Cmd err (Tree NodeTree)
75 tree TreeBasic = tree_basic
76 tree TreeAdvanced = tree_advanced
77
78 -- | Tree basic returns the Tree of Nodes in Database
79 -- (without shared folders)
80 -- keeping this for teaching purpose only
81 tree_basic :: HasTreeError err
82 => RootId
83 -> [NodeType]
84 -> Cmd err (Tree NodeTree)
85 tree_basic r nodeTypes =
86 (dbTree r nodeTypes <&> toTreeParent) >>= toTree
87 -- Same as (but easier to read) :
88 -- toTree =<< (toTreeParent <$> dbTree r nodeTypes)
89
90 -- | Advanced mode of the Tree enables shared nodes
91 tree_advanced :: HasTreeError err
92 => RootId
93 -> [NodeType]
94 -> Cmd err (Tree NodeTree)
95 tree_advanced r nodeTypes = do
96 mainRoot <- findNodes Private r nodeTypes
97 sharedRoots <- findNodes Shared r nodeTypes
98 publicRoots <- findNodes Public r nodeTypes
99 toTree $ toTreeParent (mainRoot <> sharedRoots <> publicRoots)
100
101 ------------------------------------------------------------------------
102 data NodeMode = Private | Shared | Public
103
104 findNodes :: HasTreeError err
105 => NodeMode
106 -> RootId -> [NodeType]
107 -> Cmd err [DbTreeNode]
108 findNodes Private r nt = dbTree r nt
109 findNodes Shared r nt = findShared r NodeFolderShared nt sharedTreeUpdate
110 findNodes Public r nt = findShared r NodeFolderPublic nt publicTreeUpdate
111
112
113 ------------------------------------------------------------------------
114 -- | Collaborative Nodes in the Tree
115 findShared :: HasTreeError err
116 => RootId -> NodeType -> [NodeType] -> UpdateTree err
117 -> Cmd err [DbTreeNode]
118 findShared r nt nts fun = do
119 foldersSharedId <- findNodesId r [nt]
120 trees <- mapM (updateTree nts fun) foldersSharedId
121 pure $ concat trees
122
123 type UpdateTree err = ParentId -> [NodeType] -> NodeId -> Cmd err [DbTreeNode]
124
125 updateTree :: HasTreeError err
126 => [NodeType] -> UpdateTree err -> RootId
127 -> Cmd err [DbTreeNode]
128 updateTree nts fun r = do
129 folders <- getNodeNode r
130 nodesSharedId <- mapM (fun r nts)
131 $ map _nn_node2_id folders
132 pure $ concat nodesSharedId
133
134
135 sharedTreeUpdate :: HasTreeError err => UpdateTree err
136 sharedTreeUpdate p nt n = dbTree n nt
137 <&> map (\n' -> if _dt_nodeId n' == n
138 -- && elem (fromNodeTypeId $ _dt_typeId n') [NodeGraph]
139 -- && not (elem (fromNodeTypeId $ _dt_typeId n') [NodeFile])
140 then set dt_parentId (Just p) n'
141 else n')
142
143 publicTreeUpdate :: HasTreeError err => UpdateTree err
144 publicTreeUpdate p nt n = dbTree n nt
145 <&> map (\n' -> if _dt_nodeId n' == n
146 -- && (fromNodeTypeId $ _dt_typeId n') /= NodeGraph
147 -- && not (elem (fromNodeTypeId $ _dt_typeId n') [NodeFile])
148 then set dt_parentId (Just p) n'
149 else n')
150
151
152
153 -- | findNodesId returns all nodes matching nodeType but the root (Nodeuser)
154 findNodesId :: RootId -> [NodeType] -> Cmd err [NodeId]
155 findNodesId r nt = tail
156 <$> map _dt_nodeId
157 <$> dbTree r nt
158 ------------------------------------------------------------------------
159 ------------------------------------------------------------------------
160 toTree :: ( MonadError e m
161 , HasTreeError e)
162 => Map (Maybe ParentId) [DbTreeNode]
163 -> m (Tree NodeTree)
164 toTree m =
165 case lookup Nothing m of
166 Just [n] -> pure $ toTree' m n
167 Nothing -> treeError NoRoot
168 Just [] -> treeError EmptyRoot
169 Just _ -> treeError TooManyRoots
170
171 where
172 toTree' :: Map (Maybe ParentId) [DbTreeNode]
173 -> DbTreeNode
174 -> Tree NodeTree
175 toTree' m' n =
176 TreeN (toNodeTree n) $
177 m' ^.. at (Just $ _dt_nodeId n) . _Just . each . to (toTree' m')
178
179 toNodeTree :: DbTreeNode
180 -> NodeTree
181 toNodeTree (DbTreeNode nId tId _ n) = NodeTree n nodeType nId
182 where
183 nodeType = fromNodeTypeId tId
184 ------------------------------------------------------------------------
185 toTreeParent :: [DbTreeNode]
186 -> Map (Maybe ParentId) [DbTreeNode]
187 toTreeParent = fromListWith (\a b -> nub $ a <> b) . map (\n -> (_dt_parentId n, [n]))
188 ------------------------------------------------------------------------
189 -- | Main DB Tree function
190 dbTree :: RootId
191 -> [NodeType]
192 -> Cmd err [DbTreeNode]
193 dbTree rootId nodeTypes = map (\(nId, tId, pId, n) -> DbTreeNode nId tId pId n)
194 <$> runPGSQuery [sql|
195 WITH RECURSIVE
196 tree (id, typename, parent_id, name) AS
197 (
198 SELECT p.id, p.typename, p.parent_id, p.name
199 FROM nodes AS p
200 WHERE p.id = ?
201
202 UNION
203
204 SELECT c.id, c.typename, c.parent_id, c.name
205 FROM nodes AS c
206
207 INNER JOIN tree AS s ON c.parent_id = s.id
208 WHERE c.typename IN ?
209 )
210 SELECT * from tree;
211 |] (rootId, In typename)
212 where
213 typename = map nodeTypeId ns
214 ns = case nodeTypes of
215 [] -> allNodeTypes
216 _ -> nodeTypes
217
218 isDescendantOf :: NodeId -> RootId -> Cmd err Bool
219 isDescendantOf childId rootId = (== [Only True])
220 <$> runPGSQuery [sql|
221 BEGIN ;
222 SET TRANSACTION READ ONLY;
223 COMMIT;
224
225 WITH RECURSIVE
226 tree (id, parent_id) AS
227 (
228 SELECT c.id, c.parent_id
229 FROM nodes AS c
230 WHERE c.id = ?
231
232 UNION
233
234 SELECT p.id, p.parent_id
235 FROM nodes AS p
236 INNER JOIN tree AS t ON t.parent_id = p.id
237
238 )
239 SELECT COUNT(*) = 1 from tree AS t
240 WHERE t.id = ?;
241 |] (childId, rootId)
242
243 -- TODO should we check the category?
244 isIn :: NodeId -> DocId -> Cmd err Bool
245 isIn cId docId = ( == [Only True])
246 <$> runPGSQuery [sql| SELECT COUNT(*) = 1
247 FROM nodes_nodes nn
248 WHERE nn.node1_id = ?
249 AND nn.node2_id = ?;
250 |] (cId, docId)
251 -----------------------------------------------------