2 Module : Gargantext.Database.Node.Document.Insert
3 Description : Importing context of texts (documents)
4 Copyright : (c) CNRS, 2017-Present
5 License : AGPL + CECILL v3
6 Maintainer : team@gargantext.org
7 Stability : experimental
10 * Purpose of this module
12 Enabling "common goods" of text data and respecting privacy.
14 Gargantext shares as "common good" the links between context of texts
15 and terms / words / ngrams.
17 Basically a context of text can be defined as a document (see 'Gargantext.Text').
19 Issue to tackle in that module: each global document of Gargantext has
20 to be unique, then shared, but how to respect privacy if needed ?
23 * Methodology to get uniqueness and privacy by design
25 As a consequence, when importing/inserting a new document in Gargantext,
26 a policy for the uniqueness of the inserted docuemnts has to be defined.
28 That is the purpose of this module which defines its main concepts.
30 Unique identifier in database is of a 3-tuple of 3 policies that
31 together define uniqueness:
33 - Design policy: type of node is needed as TypenameId, that is a
34 Document or Individual or something else;
36 - Privacy policy: with ParentId, parent becomes unique, then it enables
37 users to get their own copy without sharing it with all the users of the
38 database (in others words parent_id is necessary to preserve privacy for
41 - Hash policy: this UniqId is a sha256 uniq id which is the result of
42 the concatenation of the parameters defined by @hashParameters@.
45 > insertTest :: FromRow r => CorpusId -> [Node HyperdataDocument] -> IO [r]
46 > insertTest :: IO [ReturnId]
47 > insertTest = connectGargandb "gargantext.ini"
48 > >>= \conn -> insertDocuments conn 1 452162 hyperdataDocuments
51 ------------------------------------------------------------------------
52 {-# LANGUAGE DeriveDataTypeable #-}
53 {-# LANGUAGE DeriveGeneric #-}
54 {-# LANGUAGE FlexibleInstances #-}
55 {-# LANGUAGE NoImplicitPrelude #-}
56 {-# LANGUAGE OverloadedStrings #-}
57 {-# LANGUAGE QuasiQuotes #-}
58 {-# LANGUAGE TypeSynonymInstances #-}
59 ------------------------------------------------------------------------
60 module Gargantext.Database.Node.Document.Insert where
62 import Control.Lens (set)
64 import Data.Aeson (toJSON, Value)
65 import Data.ByteString.Internal (ByteString)
66 import Data.Maybe (maybe)
67 import Data.Typeable (Typeable)
68 import Database.PostgreSQL.Simple (FromRow, Query, formatQuery, query, Only(..))
69 import Database.PostgreSQL.Simple.FromRow (fromRow, field)
70 import Database.PostgreSQL.Simple.SqlQQ
71 import Database.PostgreSQL.Simple.ToField (toField)
72 import Database.PostgreSQL.Simple.ToRow (ToRow(..))
73 import Database.PostgreSQL.Simple.Types (Values(..), QualifiedIdentifier(..))
75 import Data.Text (Text)
76 import qualified Data.Text as DT (pack, unpack, concat)
77 import qualified Data.Digest.Pure.SHA as SHA (sha256, showDigest)
78 import qualified Data.ByteString.Lazy.Char8 as DC (pack)
80 import Gargantext.Database.Config (nodeTypeId)
81 import Gargantext.Database.Node (mkCmd, Cmd(..))
82 import Gargantext.Database.Types.Node
83 -- TODO : the import of Document constructor below does not work
84 -- import Gargantext.Database.Types.Node (Document)
85 --import Gargantext.Database.Types.Node (docExample, hyperdataDocument, HyperdataDocument(..)
86 -- , hyperdataDocument_uniqId
87 -- , hyperdataDocument_title
88 -- , hyperdataDocument_abstract
89 -- , hyperdataDocument_source
90 -- , Node(..), node_typename
92 -- , node_parentId, node_name, node_hyperdata, hyperdataDocuments
95 import Gargantext.Prelude
97 import GHC.Generics (Generic)
98 ---------------------------------------------------------------------------
99 -- * Main Insert functions
101 -- ** Database configuration
102 -- Administrator of the database has to create a uniq index as following SQL command:
103 -- `create unique index on nodes (typename, parent_id, (hyperdata ->> 'uniqId'));`
105 -- | Insert Document main function
106 -- UserId : user who is inserting the documents
107 -- ParentId : folder ID which is parent of the inserted documents
108 insertDocuments :: UserId -> ParentId -> [HyperdataDocument] -> Cmd [ReturnId]
109 insertDocuments uId pId hs = mkCmd $ \c -> query c queryInsert (Only $ Values fields inputData)
111 fields = map (\t-> QualifiedIdentifier Nothing t) inputSqlTypes
112 inputData = prepare uId pId hs
114 -- | Debug SQL function
116 -- to print rendered query (Debug purpose) use @formatQuery@ function.
117 insertDocuments_Debug :: UserId -> ParentId -> [HyperdataDocument] -> Cmd ByteString
118 insertDocuments_Debug uId pId hs = mkCmd $ \conn -> formatQuery conn queryInsert (Only $ Values fields inputData)
120 fields = map (\t-> QualifiedIdentifier Nothing t) inputSqlTypes
121 inputData = prepare uId pId hs
124 -- | Input Tables: types of the tables
125 inputSqlTypes :: [Text]
126 inputSqlTypes = map DT.pack ["int4","int4","int4","text","jsonb"]
128 -- | SQL query to insert documents inside the database
131 WITH input_rows(typename,user_id,parent_id,name,hyperdata) AS (?)
133 INSERT INTO nodes (typename,user_id,parent_id,name,hyperdata)
134 SELECT * FROM input_rows
135 ON CONFLICT ((hyperdata ->> 'uniqIdBdd')) DO NOTHING -- on unique index
136 -- ON CONFLICT (typename, parent_id, (hyperdata ->> 'uniqId')) DO NOTHING -- on unique index
137 RETURNING id,hyperdata
140 SELECT true AS source -- true for 'newly inserted'
142 , hyperdata ->> 'uniqId' as doi
145 SELECT false AS source -- false for 'not inserted'
147 , hyperdata ->> 'uniqId' as doi
149 JOIN nodes c USING (hyperdata); -- columns of unique index
152 prepare :: UserId -> ParentId -> [HyperdataDocument] -> [InputData]
153 prepare uId pId = map (\h -> InputData tId uId pId (maybe "No Title of Document" identity $ _hyperdataDocument_title h)
154 (toJSON $ addUniqId h)
157 tId = nodeTypeId NodeDocument
159 ------------------------------------------------------------------------
164 -- | When documents are inserted
165 -- ReturnType after insertion
166 data ReturnId = ReturnId { reInserted :: Bool -- ^ if the document is inserted (True: is new, False: is not new)
167 , reId :: Int -- ^ always return the id of the document (even new or not new)
168 -- this is the uniq id in the database
169 , reUniqId :: Maybe Text -- ^ Hash Id with concatenation of hash parameters
170 } deriving (Show, Generic)
172 instance FromRow ReturnId where
173 fromRow = ReturnId <$> field <*> field <*> field
180 data InputData = InputData { inTypenameId :: NodeTypeId
182 , inParentId :: ParentId
185 } deriving (Show, Generic, Typeable)
187 instance ToRow InputData where
188 toRow inputData = [ toField (inTypenameId inputData)
189 , toField (inUserId inputData)
190 , toField (inParentId inputData)
191 , toField (inName inputData)
192 , toField (inHyper inputData)
195 ---------------------------------------------------------------------------
196 -- * Uniqueness of document definition
198 addUniqId :: HyperdataDocument -> HyperdataDocument
199 addUniqId doc = set hyperdataDocument_uniqIdBdd (Just hashBdd)
200 $ set hyperdataDocument_uniqId (Just hash) doc
202 hash = uniqId $ DT.concat $ map ($ doc) hashParameters
203 hashBdd = uniqId $ DT.concat $ map ($ doc) ([(\d -> maybe' (_hyperdataDocument_bdd d))] <> hashParameters)
205 uniqId :: Text -> Text
206 uniqId = DT.pack . SHA.showDigest . SHA.sha256 . DC.pack . DT.unpack
209 hashParameters :: [(HyperdataDocument -> Text)]
210 hashParameters = [ \d -> maybe' (_hyperdataDocument_title d)
211 , \d -> maybe' (_hyperdataDocument_abstract d)
212 , \d -> maybe' (_hyperdataDocument_source d)
213 , \d -> maybe' (_hyperdataDocument_publication_date d)
216 maybe' :: Maybe Text -> Text
217 maybe' = maybe (DT.pack "") identity
219 ---------------------------------------------------------------------------