CHANGELOG.md

   1 ## Version 0.0.6.8.5.7
   2
   3 * [FRONT][FIX][Graph Explorer Blank Page (#465)](https://gitlab.iscpif.fr/gargantext/purescript-gargantext/issues/465)
   4
   5 ## Version 0.0.6.8.5.6
   6
   7 * [BACK][FIX][Group breaks List with Backend (#156)](https://gitlab.iscpif.fr/gargantext/haskell-gargantext/issues/156)
   8 * [BACK][FIX] Spacy Bug if String is empty
   9
  10 ## Version 0.0.6.8.5.5
  11
  12 * [FRONT][FEAT][Adding unary document: Language option (#445)](https://gitlab.iscpif.fr/gargantext/purescript-gargantext/issues/445)
  13
  14 ## Version 0.0.6.8.5.4
  15 * [BACK][FIX] FIX Ngrams List building
  16
  17 ## Version 0.0.6.8.5.3
  18
  19 * [BACK][FIX][Pubmed parser (#151)](https://gitlab.iscpif.fr/gargantext/haskell-gargantext/issues/151)
  20
  21 ## Version 0.0.6.8.5.2
  22
  23 * [BACK][CI][jobqueue test: tweak delay for more stable CI
  24   results?](https://gitlab.iscpif.fr/gargantext/haskell-gargantext/merge_requests/112)
  25 * [FRONT][FIX][User email change doesn&#39;t work (#469)](https://gitlab.iscpif.fr/gargantext/purescript-gargantext/issues/469)
  26 * [FRONT][FIX][Graph Explorer Blank Page (#465)](https://gitlab.iscpif.fr/gargantext/purescript-gargantext/issues/465)
  27 * [FRONT][FIX][NgramsTable: user orderBy parameter (#468)](https://gitlab.iscpif.fr/gargantext/purescript-gargantext/issues/468)
  28
  29 ## Version 0.0.6.8.5.1
  30
  31 * [BACK][FIX] Indexing issue: taking all terms instead of longest of terms in case of ngrams included in others
  32 * [FRONT][FIX][Disconnection of instance causes a blank page (#464)](https://gitlab.iscpif.fr/gargantext/purescript-gargantext/issues/464)
  33 * [BACK][FIX] ArXiv search in Abstracts by default
  34
  35 ## Version 0.0.6.8.5
  36 * [BACK][FIX][Ngrams Table, page sort / limit (#149)](https://gitlab.iscpif.fr/gargantext/haskell-gargantext/issues/149)
  37 * [FRONT][FIX][Security Issue with Teams (#452)](https://gitlab.iscpif.fr/gargantext/purescript-gargantext/issues/452)
  38 * [FRONT][FIX][Darkster Mode: when creating a node we miss informations (#461)](https://gitlab.iscpif.fr/gargantext/purescript-gargantext/issues/461)
  39
  40 ## Version 0.0.6.8.4
  41 * [BACK][FEAT] Fix reindexing functions
  42 * [FRONT][FIX][FEEDBACK ON 0.0.6.8.2 (#459)](https://gitlab.iscpif.fr/gargantext/purescript-gargantext/issues/459)
  43
  44 ## Version 0.0.6.8.3
  45
  46 * [INFO][UPGRADE] To upgrade use the 0.0.6.8.3.sql script
  47 * [FRONT][SECU][Security Issue with Teams (#452)](https://gitlab.iscpif.fr/gargantext/purescript-gargantext/issues/452)
  48 * [FRONT][FEAT][Graph Explorer: disable controls when ForceAtlas is running (#451)](https://gitlab.iscpif.fr/gargantext/purescript-gargantext/issues/451)
  49 * [FRONT][FIX][[Doc date filter] Filter by multiple dates (#450)](https://gitlab.iscpif.fr/gargantext/purescript-gargantext/issues/450)
  50 * [FRONT][ERGO][[layout] Description node block hide feature (#447)](https://gitlab.iscpif.fr/gargantext/purescript-gargantext/issues/447)
  51 * [FRONT][ERGO][[layout] Node view additions (#448)](https://gitlab.iscpif.fr/gargantext/purescript-gargantext/issues/448)
  52 * [BACK][FIX][Problem at list import (#148)](https://gitlab.iscpif.fr/gargantext/haskell-gargantext/issues/148)
  53 * [FRONT][FIX][CSS in Graph Explorer toolbar (#460)](https://gitlab.iscpif.fr/gargantext/purescript-gargantext/issues/460)
  54 * [BACK][FEAT] Bridgeness with more links
  55
  56
  57 ## Version 0.0.6.8.2
  58
  59 * [FRONT][FIX][[Doc view] By default sort document from latest to oldest (#457)](https://gitlab.iscpif.fr/gargantext/purescript-gargantext/issues/457)
  60 * [FRONT][FIX][Regression on Documents&#39; annotation (#456)](https://gitlab.iscpif.fr/gargantext/purescript-gargantext/issues/456)
  61 * [FRONT][FIX][[layout] Move Cache CTA to topbar (#446)](https://gitlab.iscpif.fr/gargantext/purescript-gargantext/issues/446)
  62 * [FRONT][FIX][Graph Explorer: node status change to either candidates or stop (#454)](https://gitlab.iscpif.fr/gargantext/purescript-gargantext/issues/454)
  63
  64 ## Version 0.0.6.8.1
  65
  66 * [BACK][IMPROVEMENT] Ngrams Extraction without verbs and with better Parsing for French Pos.
  67 * [BACK][FIX] SQL error disconnection, tested, the issue should be closed
  68
  69 ## Version 0.0.6.8
  70 * [BACK][FEAT][Flexible job queue system](https://gitlab.iscpif.fr/gargantext/haskell-gargantext/merge_requests/109)
  71 * [FRONT][FEAT][Doc View, Histogram click on bar -&gt; select documents by Date (#430)](https://gitlab.iscpif.fr/gargantext/purescript-gargantext/issues/430)
  72 * [BACK][OPTIM][Ngrams Table, queries optimization (#144)](https://gitlab.iscpif.fr/gargantext/haskell-gargantext/issues/144)
  73 * [FRONT][UPGRADE][Upgrade PS to 0.15 (#395)](https://gitlab.iscpif.fr/gargantext/purescript-gargantext/issues/395)
  74 * [FRONT][GRAPH][Filtering edge weight bring back new edges (#442)](https://gitlab.iscpif.fr/gargantext/purescript-gargantext/issues/442)
  75 * [FRONT][GRAPH][Louvain clustering on filtered graph (#418)](https://gitlab.iscpif.fr/gargantext/purescript-gargantext/issues/418)
  76 * [FRONT][GRAPH][GraphExplorer Node size slider (#215)](https://gitlab.iscpif.fr/gargantext/purescript-gargantext/issues/215)
  77 * [FRONT][GRAPH][Graph Explorer : link filtering does not impact spatialization (#243)](https://gitlab.iscpif.fr/gargantext/purescript-gargantext/issues/243)
  78
  79 ## Version 0.0.6.7.1
  80 * [FRONT][FIX][[maplist upload] bugged modal after upload (#440)](https://gitlab.iscpif.fr/gargantext/purescript-gargantext/issues/440)
  81 * [BACK][OPTIM][Ngrams Table, queries optimization (#144)](https://gitlab.iscpif.fr/gargantext/haskell-gargantext/issues/144)
  82 * [BACK][CONFIG] gargantext.ini needs new field
  83                 BACKEND_NAME = THE INSTANCE NAME
  84
  85 ## Version 0.0.6.7
  86 * [GRAPH][FIX] Nodes with one edge only are removed now
  87 * [FRONT][GRAPH] Option to chose the clustering method is not shown any more.
  88
  89 ## Version 0.0.6.6
  90 * [FRONT][UPGRADE][Upgrade PS to 0.15 (#395)](https://gitlab.iscpif.fr/gargantext/purescript-gargantext/issues/395)
  91   * SigmaJS upgrade inside
  92 * [BACK][OPTIM] [Confluence optimization (#137)](https://gitlab.iscpif.fr/gargantext/haskell-gargantext/issues/137)
  93 * [FRONT][FIX][[maplist upload] bugged modal after upload (#440)](https://gitlab.iscpif.fr/gargantext/purescript-gargantext/issues/440)
  94
  95 ## Version 0.0.6.5.1
  96 * [BACK][FIX] Ngrams Table concurrency issue. [Issue 143](https://gitlab.iscpif.fr/gargantext/haskell-gargantext/issues/143)
  97 * [BACK][MERGE] dev-phylo branch
  98 * [FRONT][FIX] If space are in username or password
  99
 100 ## Version 0.0.6.5
 101 * [BACKFRONT][FIX] APIs HAL et ISTEX
 102 * [FRONT][FIX] Search page parameters to 0 for the result
 103
 104 ## Version 0.0.6.4
 105 * [FRONT][FIX] Modal closing
 106 * [FRONT][TEAM] Show leader of the Team. [Issue 438](https://gitlab.iscpif.fr/gargantext/haskell-gargantext/issues/438)
 107 * [FRONT][ADM] [Forgot password] disable input field after submit
 108
 109 ## Version 0.0.6.3
 110 * [BACK][FRONT][FEAT] FR NLP connection tested
 111 * [FRONT][ERGO] click on node to get the modal actions
 112 * [BACK][DOC] default name of folder
 113
 114 ## Version 0.0.6.2
 115 * [BACK][FIX] Ngrams List saved in database on halting
 116 * [BACK][FIX] Confluence on Graph
 117 * [BACK][FIX] HAL parser fix
 118 * [BACK][UPGRADE] ./bin/psql gargantext.ini < devops/postgres/upgrade/0.0.6.2.sql
 119 * [BACK][ADMIN] upgrade script, test ok
 120 * [BACK][FIX][API] IsTex
 121 * [BACK][ADM] Invitation script
 122
 123 ## Version 0.0.6.1
 124 * [BACK][FEAT] Spacy Server connection for French (and others) languages
 125   * git clone https://gitlab.iscpif.fr/gargantext/spacy-server.git
 126 * [BACK][FEAT] At startup, check if gargantext.init script has been activated
 127 * [BACK][UPGRADE] Use the devops/postgres/upgrade/0.0.6.1.sql upgrade script
 128 * [BACK][FIX] PubMed Parser with threadDelay
 129 * [BACK][FIX] Hash to remove duplicates on filtered text
 130
 131 ## Version 0.0.6
 132 * [BACK][OPTIM] Ngrams Table optmization. To upgrade:
 133       1. `./bin/psql gargantext.ini < devops/postgresql/upgrade/0.0.6.sql`
 134       2. in `stack --nix repl` run `runCmdReplEasy $ migrateFromDirToDb`
 135 * [FRONT][FIX] Ngrams Table next button: loads only one time instead of twice previously
 136 * [FRONT][FIX] Resize handler on Write Node
 137 * [FRONT][FIX] Do not highlight ngrams if maximum abstract length > 4500 characters
 138
 139 ## Version 0.0.5.9.6
 140 * [BACK][FIX] Nix build ok
 141 * [BACK][OPTI] Confluence optimization
 142 * [FRONT][GACK][FEAT] Team management
 143 * [FRONT][FEAT] Legend for graph
 144
 145 ## Version 0.0.5.9.5
 146 * [FRONT][FIX] View Document List fix CSS
 147 * [FRONT][FIX] Node Modal fix
 148
 149 ## Version 0.0.5.9.4
 150 * [FIX] Arxiv API fix
 151 * [DESIGN/ERGO] Tree node position highlight
 152
 153 ## Version 0.0.5.9.3
 154 * [FEAT] Graph options with Links Strength
 155
 156 ## Version 0.0.5.9.2
 157 * [FEAT] User description field to User page
 158 * [FIX] Ngrams Table cache on
 159 * [FEAT] Ngrams Status change from Phylo Explorer
 160 * [OPTIM] Graph Order 2 generation
 161 * [FIX] Forgot password improvement
 162
 163 ## Version 0.0.5.9.1
 164 * [FIX] Graph self referencing nodes
 165 * [FIX] Ngrams Table Tree CSS
 166 * [FIX] Ngrams Table Search with enter only
 167 * [FIX] Graph build: removing mergechildren function for tests
 168
 169 ## Version 0.0.5.9
 170 * [FIX] Annuaire Contact Page
 171 * [WIP] Graph Debug (mergeNgrams enabled again)
 172
 173 ## Version 0.0.5.8.9.9
 174 * [FIX] Debug Graph Labels
 175 * [FIX] schema upgraded, use 0.0.5.7.8.sql to upgrade your database
 176 * [FEAT] Script to create and sending email to user: invitation
 177
 178 ## Version 0.0.5.8.9.8
 179 * [ERGO] NgramsTable, change group and search for ngrams to add
 180 * [FIX] Board, Source Chart fix
 181
 182 ## Version 0.0.5.8.9.7
 183 * [FEAT] Infomap Clustering
 184
 185 ## Version 0.0.5.8.9.6
 186 * [FIX] IsTex crawler working with basic queries (i.e. without quotes)
 187
 188 ## Version 0.0.5.8.9.5
 189 * [FIX] FrontEnd maybe ParentId
 190 * [FIX] IsTex crawler
 191
 192 ## Version 0.0.5.8.9.4
 193 * [FE] [FEAT] Phylo Explorer, interactions with documents
 194 * [FE] [ERGO] Fonts in Ngrams Table
 195
 196 ## Version 0.0.5.8.9.3
 197 * [BE] [FIX] garg password function
 198 * [FE] [FIX] Trees closing/opening issue
 199 * [FE] [FIX] Viz Explorer Side Panel
 200
 201 ## Version 0.0.5.8.9.2
 202 * [FEAT] Lost Password
 203 * [Phylo] More Data in API
 204
 205 ## Version 0.0.5.8.9.1
 206 * [FE] [DESIGN] NoteBook, UI/UX Improvements
 207 * [FE] [FEAT] Automatic Sync when adding a new ngrams
 208 * [FE] Frame Page
 209
 210 ## Version 0.0.5.8.9
 211 * [COUNTS] Chart update when docs are deleted or added
 212 * [ERGO] Plane navigation improved
 213 * [ERGO] Mouse misalignemnt fixed
 214 * [FIX] Date parser WOS
 215 * [FIX] Node names: List -> Terms
 216
 217 ## Version 0.0.5.8.8.2
 218 * [FE] Fix Contact Page
 219
 220 ## Version 0.0.5.8.8.1
 221 * [FE] Fix regression on Graph Explorer: edges color + confluence filter
 222
 223 ## Version 0.0.5.8.8
 224 * [FE] Fix regression on Graph Explorer for annuaire
 225 * [FE] Graph Doc Focus
 226
 227 ## Version 0.0.5.8.7.2
 228 * [BE] Docker solution for codebook
 229
 230 ## Version 0.0.5.8.7.1
 231 * [BE] Annuaire pairing, using full first name
 232
 233 ## Version 0.0.5.8.7
 234 * [FE] Graph Explorer Document exploration improvements
 235
 236 ## Version 0.0.5.8.6
 237 * [FE] Plane navigation improvements
 238
 239 ## Version 0.0.5.8.5.1
 240 * [FRONT] FIX CSS Forest
 241
 242 ## Version 0.0.5.8.5
 243 * [FRONT] CSS + Design, Graph Toolbar and many things
 244 * [BACK] Security FIX GQL route
 245 * [BACK] Arxiv API connexion
 246
 247 ## Version 0.0.5.8.4
 248 * [BACK] GraphQL routes
 249 * [FRONT] CSS, Forest Sidebar
 250 * [HAL] parser back and front
 251
 252 ## Version 0.0.5.8.3
 253 * [CRAWLERS] HAL for organizations, example done for IMT
 254
 255 ## Version 0.0.5.8.2
 256 * [FIX] Regex Error on HAL Date parsing with Duckling
 257
 258 ## Version 0.0.5.8.1
 259 * [FIX] Folder Up button working well now, using GraphQL
 260
 261 ## Version 0.0.5.8
 262 * [FIX] reindex ngrams-contexts function
 263 * [PARAM] decreasing the Candidate list
 264 * [FEAT] enabling Notebooks for Teams
 265 * [REFACT] Page user and email refactoring
 266
 267 ## Version 0.0.5.7.9.1
 268 * [FIX] Group revert + NLP French API implemented (WIP)
 269 * Default Names of Folder and Frames simplified
 270
 271 ## Version 0.0.5.7.9
 272 * [FEAT] New NLP server for postagging
 273 * [FIX] Spinglass unconnected componnent of graph
 274
 275 ## Version 0.0.5.7.8
 276 * [FIX] PubMed limit parser
 277
 278 ## Version 0.0.5.7.7
 279 * [FEAT FIX] Link Annuaire Corpus (WIP)
 280 * [UPGRADE METHOD] ./bin/psql gargantext.ini < devops/postgres/upgrade/0.0.5.7.7.sql
 281
 282 ## Version 0.0.5.7.6
 283 * [FIX] Default behavior of Ngrams Table: Cache off and Desc order by score
 284
 285 ## Version 0.0.5.7.5
 286 * [FIX] Progress length
 287
 288 ## Version 0.0.5.7.4
 289 * [FIX] User Page info get/update/security
 290
 291 ## Version 0.0.5.7.3
 292 * [OPTIM] HAL and PubMed parsers with Conduit
 293 * [BACK] Zip files added
 294
 295 ## Version 0.0.5.7.2
 296 * [FIX] Phylo default parameters on frontend side
 297
 298 ## Version 0.0.5.7.1
 299 * [FIX] Phylo error findBounds fixed
 300
 301 ## Version 0.0.5.7
 302 * [FEAT] Phylo Backend/Frontend connected for tests
 303
 304 ## Version 0.0.5.6.7
 305 * [BACK] fix limit with MAX_DOCS_SCRAPERS
 306 * [FEAT] Users Password Sugar function : in repl, runCmdReplEasy $ updateUsersPassword  ["user@mail.com"]
 307
 308 ## Version 0.0.5.6.6
 309 * [BACK] CSV List post and reindex after (for both CSV and JSON)
 310
 311 ## Version 0.0.5.6.5
 312 * [BACK] HAL parser with Conduit
 313
 314 ## Version 0.0.5.6.4
 315 * [FRONT] Forest Tooltip + Async progress bar fix
 316
 317 ## Version 0.0.5.6.3
 318 * [BACK][EXPORT][GEXF] node size
 319
 320 ## Version 0.0.5.6.2
 321 * [FRONT][FIX] Ngrams Batch change
 322
 323 ## Version 0.0.5.6.1
 324 * [BACK][FEAT] Confluence Method connection
 325
 326 ## Version 0.0.5.6
 327 * [BACK][FEAT] Phylo backend connection
 328 * [FRONT] Editable Metadata
 329
 330 ## Version 0.0.5.5.7
 331 * [FRONT][FIX] NgramsTable Cache search.
 332
 333 ## Version 0.0.5.5.6
 334 * [BACK][FIX] ./bin/psql gargantext.ini < devops/posgres/upgrade/0.0.5.5.6.sql
 335 * [FRONT] fix NodeType list show (Nodes options)
 336
 337 ## Version 0.0.5.5.5
 338 * [FORNT] fix Graph Explorer search ngrams
 339 * [FRONT] fix NodeType list show (main Nodes)
 340
 341 ## Version 0.0.5.5.4
 342 * [BACK][OPTIM] NgramsTable scores
 343 * [BACK] bin/client script to analyze backend performance and reproduce bugs
 344 * [FRONT] Adding Language selection
 345
 346 ## Version 0.0.5.5.3
 347 * [BACK] Adding a Max limit for others lists.
 348
 349 ## Version 0.0.5.5.2
 350 * [BACK][OPTIM] Index on node_node_ngrams to seed up ngrams table score
 351   queries. Please execute the upgrade SQL script
 352   devops/postgres/0.0.5.5.2.sql
 353
 354 ## Version 0.0.5.5.1
 355 * [BACK] FIX Graph Explorer search with selected ngrams
 356 * [FRONT] Clean CSS
 357
 358 ## Version 0.0.5.5
 359 * [FRONT] Visio frame removed, using a new tab instead (which is working)
 360 * [BACK] Scores on the docs view fixed
 361
 362 ## Version 0.0.5.3
 363 * [FRONT] SSL local option
 364
 365 ## Version 0.0.5.2
 366 * [QUAL] Scores in Ngrams Table fixed during workflow and user can
 367   refresh it if needed.
 368
 369 ## Version 0.0.5.1
 370 * [OPTIM] Upgrade fix with indexes and scores counts
 371
 372 ## Version 0.0.5
 373 * [OPTIM][DATABASE] Upgrade Schema, move conTexts in contexts table which requires a version bump.
 374
 375 ## Version 0.0.4.9.9.6
 376 * [BACK] PubMed parser fixed
 377 * [FRONT] Visio Frame resized
 378
 379 ## Version 0.0.4.9.9.5
 380 * [FIX] Chart Sort
 381
 382 ## Version 0.0.4.9.9.4
 383 * [FEAT] Corpus docs download
 384
 385 ## Version 0.0.4.9.9.3
 386 * [BACK] Graph update with force option
 387
 388 ## Version 0.0.4.9.9.2
 389 * [BACK] Opaleye Upgrade
 390
 391 ## Version 0.0.4.9.9.1
 392 * [FRONT] 350-dev-graph-search-in-forms-not-labels
 393 * [FRONT] 359-dev-input-with-autocomplete
 394
 395 ## Version 0.0.4.9.9
 396 * [FIX] Continuous Integration (CI)
 397
 398 ## Version 0.0.4.9.8
 399 * [FEAT] All backend routes with clients functions
 400
 401 ## Version 0.0.4.9.7
 402 * [FEAT] Searx API done (needs a fix for language selection)
 403
 404 ## Version 0.0.4.9.6
 405 * [UX] GT.query forces trees reload for async tasks
 406
 407 ## Version 0.0.4.9.5
 408 * [FEAT] Order 2 fixed with filtered edges
 409
 410 ## Version 0.0.4.9.4
 411 * [FEAT] Order 1 similarity validated and optimized
 412
 413 ## Version 0.0.4.9.3
 414 * [FIX] Node Calc import + more flexible delimiter for CSV parser
 415
 416 ## Version 0.0.4.9.2
 417 * [FEAT] Node Calc Parsing added (in tests)
 418
 419 ## Version 0.0.4.9.1
 420 * [FIX] Graph Screenshot
 421
 422 ## Version 0.0.4.9
 423 * [FEAT] Graph with order 1 and order 2 and node size
 424
 425 ## Version 0.0.4.8.9
 426 * BACKEND: fix psql function util without sensitive data
 427 * FRONTEND: fix folder navigation (up link)
 428
 429 ## Version 0.0.4.8.8
 430 * FIX for CI
 431
 432 ## Version 0.0.4.8.7
 433 * FIX the graph generation (automatic/default, renewal, any distance)
 434
 435 ## Version 0.0.4.8.6
 436 * FIX the ngrams grouping
 437
 438 ## Version 0.0.4.8.5
 439 * Unary document insertion: Doc table is reloaded after upload
 440
 441 ## Version 0.0.4.8.4
 442 * Migration: instance dev is now dev.sub.gargantext.org
 443
 444 ## Version 0.0.4.1
 445 * Refact/code design better syntax for DataType fields
 446
 447 ## Version 0.0.4
 448 * Fix the search in Title and abstracts.
 449 * [UPGRADE] execute devops/postgres/upgrade/0.0.4.sql to your database to upgrade it
 450
 451 ## Version 0.0.3.9.1
 452 * Graph Update fix
 453 * Document view: full text removed
 454
 455 ## Version 0.0.0.2
 456 * Fix the community detection.
 457 * TextFlow starts to make sense
 458
 459 ## Version 0.0.0.1
 460 * Very first version (main functions ready for tests) of Haskell Version
 461   of Gargantext. Previous versions (3) were written with another
 462   language and another framework (Python/Javascript mainly).