src/Gargantext/Core/Methods/Distances/Conditional.hs

   1 {-|
   2 Module      : Gargantext.Core.Methods.Distances
   3 Description :
   4 Copyright   : (c) CNRS, 2017-Present
   5 License     : AGPL + CECILL v3
   6 Maintainer  : team@gargantext.org
   7 Stability   : experimental
   8 Portability : POSIX
   9
  10 Motivation and definition of the @Conditional@ distance.
  11 -}
  12
  13 {-# LANGUAGE BangPatterns      #-}
  14 {-# LANGUAGE Strict            #-}
  15 module Gargantext.Core.Methods.Distances.Conditional
  16   where
  17
  18 import Control.DeepSeq (NFData)
  19 import Control.Parallel.Strategies (parList, rdeepseq, using)
  20 import Data.Hashable (Hashable)
  21 import Data.List (unzip)
  22 import Data.Maybe (catMaybes)
  23 import Gargantext.Prelude
  24 import Gargantext.Core.Viz.Graph.Utils (getMax)
  25 import qualified Data.HashMap.Strict as Map
  26 import qualified Data.Set            as Set
  27
  28
  29 type HashMap = Map.HashMap
  30 ------------------------------------------------------------------------
  31 -- First version as first implementation
  32 -- - qualitatively verified
  33 -- - parallized as main optimization
  34 conditional :: (Ord a, Hashable a, NFData a)
  35             => HashMap (a,a) Int
  36             -> HashMap (a,a) Double
  37 conditional m' = Map.fromList $ ((catMaybes results') `using` parList rdeepseq)
  38   where
  39     results' = [ let
  40                   ij = (/) <$> Map.lookup (i,j) m <*> Map.lookup (i,i) m
  41                   ji = (/) <$> Map.lookup (j,i) m <*> Map.lookup (j,j) m
  42                   in getMax (i,j) ij ji
  43
  44                | i <- keys
  45                , j <- keys
  46                , i < j
  47                ]
  48     -- Converting from Int to Double
  49     m       = Map.map fromIntegral m'
  50
  51     -- Get the matrix coordinates, removing duplicates
  52     keys    = Set.toList $ Set.fromList (x <> y)
  53     (x,y)   = unzip $ Map.keys m
  54
  55
  56
  57
  58