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maybe fix the phylo issue
[gargantext.git] / src / Gargantext / API / Node / Update.hs
1 {-|
2 Module : Gargantext.API.Node.Update
3 Description :
4 Copyright : (c) CNRS, 2017-Present
5 License : AGPL + CECILL v3
6 Maintainer : team@gargantext.org
7 Stability : experimental
8 Portability : POSIX
9
10 -}
11
12 {-# LANGUAGE TemplateHaskell #-}
13 {-# LANGUAGE TypeOperators #-}
14 {-# OPTIONS_GHC -fno-warn-orphans #-}
15
16 module Gargantext.API.Node.Update
17 where
18
19 import Control.Lens (view)
20 import Data.Aeson
21 import Data.Maybe (Maybe(..), fromMaybe)
22 import Data.Swagger
23 import GHC.Generics (Generic)
24 import Gargantext.API.Admin.EnvTypes (GargJob(..), Env)
25 import Gargantext.API.Admin.Orchestrator.Types (JobLog(..), AsyncJobs)
26 import Gargantext.API.Admin.Types (HasSettings)
27 import Gargantext.API.Ngrams.List (reIndexWith)
28 --import Gargantext.API.Ngrams.Types (TabType(..))
29 import Gargantext.API.Prelude (GargM, GargError, simuLogs)
30 import Gargantext.Core.Methods.Similarities (GraphMetric(..))
31 import Gargantext.Core.Types.Main (ListType(..))
32 import Gargantext.Core.Viz.Graph.API (recomputeGraph)
33 import Gargantext.Core.Viz.Graph.Tools (PartitionMethod(..), BridgenessMethod(..))
34 import Gargantext.Core.Viz.Graph.Types (Strength)
35 import Gargantext.Core.Viz.Phylo (PhyloSubConfigAPI(..), subConfigAPI2config)
36 import Gargantext.Core.Viz.Phylo.API.Tools (flowPhyloAPI)
37 import Gargantext.Database.Action.Flow.Pairing (pairing)
38 import Gargantext.Database.Action.Flow.Types (FlowCmdM)
39 import Gargantext.Database.Action.Metrics (updateNgramsOccurrences, updateContextScore)
40 import Gargantext.Database.Admin.Types.Hyperdata
41 import Gargantext.Database.Admin.Types.Node
42 import Gargantext.Database.Query.Table.Node (defaultList, getNode)
43 import Gargantext.Database.Query.Table.Node.UpdateOpaleye (updateHyperdata)
44 import Gargantext.Database.Schema.Ngrams (NgramsType(NgramsTerms))
45 import Gargantext.Database.Schema.Node (node_parent_id)
46 import Gargantext.Prelude (Bool(..), Ord, Eq, (<$>), ($), liftBase, (.), {-printDebug,-} pure, show, cs, (<>), panic, (<*>))
47 import Gargantext.Utils.Jobs (serveJobsAPI)
48 import Prelude (Enum, Bounded, minBound, maxBound)
49 import Servant
50 import Test.QuickCheck (elements)
51 import Test.QuickCheck.Arbitrary
52 import qualified Data.Set as Set
53 import qualified Gargantext.API.Metrics as Metrics
54 import qualified Gargantext.API.Ngrams.Types as NgramsTypes
55 import qualified Gargantext.Utils.Aeson as GUA
56
57 ------------------------------------------------------------------------
58 type API = Summary " Update node according to NodeType params"
59 :> AsyncJobs JobLog '[JSON] UpdateNodeParams JobLog
60
61 ------------------------------------------------------------------------
62 data UpdateNodeParams = UpdateNodeParamsList { methodList :: !Method }
63
64 | UpdateNodeParamsGraph { methodGraphMetric :: !GraphMetric
65 , methodGraphClustering :: !PartitionMethod
66 , methodGraphBridgeness :: !BridgenessMethod
67 , methodGraphEdgesStrength :: !Strength
68 , methodGraphNodeType1 :: !NgramsType
69 , methodGraphNodeType2 :: !NgramsType
70 }
71
72 | UpdateNodeParamsTexts { methodTexts :: !Granularity }
73
74 | UpdateNodeParamsBoard { methodBoard :: !Charts }
75
76 | LinkNodeReq { nodeType :: !NodeType
77 , id :: !NodeId }
78
79 | UpdateNodePhylo { config :: !PhyloSubConfigAPI }
80 deriving (Generic)
81
82 ----------------------------------------------------------------------
83 data Method = Basic | Advanced | WithModel
84 deriving (Generic, Eq, Ord, Enum, Bounded)
85
86 ----------------------------------------------------------------------
87 data Granularity = NewNgrams | NewTexts | Both
88 deriving (Generic, Eq, Ord, Enum, Bounded)
89
90 ----------------------------------------------------------------------
91 data Charts = Sources | Authors | Institutes | Ngrams | All
92 deriving (Generic, Eq, Ord, Enum, Bounded)
93
94 ------------------------------------------------------------------------
95 api :: UserId -> NodeId -> ServerT API (GargM Env GargError)
96 api uId nId =
97 serveJobsAPI UpdateNodeJob $ \p log'' ->
98 let
99 log' x = do
100 -- printDebug "updateNode" x
101 liftBase $ log'' x
102 in updateNode uId nId p (liftBase . log')
103
104 updateNode :: (HasSettings env, FlowCmdM env err m)
105 => UserId
106 -> NodeId
107 -> UpdateNodeParams
108 -> (JobLog -> m ())
109 -> m JobLog
110 updateNode uId nId (UpdateNodeParamsGraph metric partitionMethod bridgeMethod strength nt1 nt2) logStatus = do
111
112 logStatus JobLog { _scst_succeeded = Just 1
113 , _scst_failed = Just 0
114 , _scst_remaining = Just 1
115 , _scst_events = Just []
116 }
117 -- printDebug "Computing graph: " method
118 _ <- recomputeGraph uId nId partitionMethod bridgeMethod (Just metric) (Just strength) nt1 nt2 True
119 -- printDebug "Graph computed: " method
120
121 pure JobLog { _scst_succeeded = Just 2
122 , _scst_failed = Just 0
123 , _scst_remaining = Just 0
124 , _scst_events = Just []
125 }
126
127 updateNode _uId nid1 (LinkNodeReq nt nid2) logStatus = do
128 logStatus JobLog { _scst_succeeded = Just 1
129 , _scst_failed = Just 0
130 , _scst_remaining = Just 1
131 , _scst_events = Just []
132 }
133 _ <- case nt of
134 NodeAnnuaire -> pairing nid2 nid1 Nothing -- defaultList
135 NodeCorpus -> pairing nid1 nid2 Nothing -- defaultList
136 _ -> panic $ "[G.API.N.Update.updateNode] NodeType not implemented"
137 <> cs (show nt <> " nid1: " <> show nid1 <> " nid2: " <> show nid2)
138
139 pure JobLog { _scst_succeeded = Just 2
140 , _scst_failed = Just 0
141 , _scst_remaining = Just 0
142 , _scst_events = Just []
143 }
144
145 -- | `Advanced` to update graphs
146 updateNode _uId lId (UpdateNodeParamsList Advanced) logStatus = do
147 logStatus JobLog { _scst_succeeded = Just 1
148 , _scst_failed = Just 0
149 , _scst_remaining = Just 2
150 , _scst_events = Just []
151 }
152 corpusId <- view node_parent_id <$> getNode lId
153
154 logStatus JobLog { _scst_succeeded = Just 2
155 , _scst_failed = Just 0
156 , _scst_remaining = Just 1
157 , _scst_events = Just []
158 }
159
160 _ <- case corpusId of
161 Just cId -> do
162 _ <- Metrics.updatePie cId (Just lId) NgramsTypes.Authors Nothing
163 _ <- Metrics.updateTree cId (Just lId) NgramsTypes.Institutes MapTerm
164 _ <- Metrics.updatePie cId (Just lId) NgramsTypes.Sources Nothing
165 pure ()
166 Nothing -> pure ()
167
168 pure JobLog { _scst_succeeded = Just 3
169 , _scst_failed = Just 0
170 , _scst_remaining = Just 0
171 , _scst_events = Just []
172 }
173
174 updateNode _uId lId (UpdateNodeParamsList _mode) logStatus = do
175 logStatus JobLog { _scst_succeeded = Just 1
176 , _scst_failed = Just 0
177 , _scst_remaining = Just 2
178 , _scst_events = Just []
179 }
180 corpusId <- view node_parent_id <$> getNode lId
181
182 logStatus JobLog { _scst_succeeded = Just 2
183 , _scst_failed = Just 0
184 , _scst_remaining = Just 1
185 , _scst_events = Just []
186 }
187
188 _ <- case corpusId of
189 Just cId -> do
190 _ <- reIndexWith cId lId NgramsTerms (Set.singleton MapTerm)
191 _ <- updateNgramsOccurrences cId (Just lId)
192 pure ()
193 Nothing -> pure ()
194
195 pure JobLog { _scst_succeeded = Just 3
196 , _scst_failed = Just 0
197 , _scst_remaining = Just 0
198 , _scst_events = Just []
199 }
200
201 updateNode _userId phyloId (UpdateNodePhylo config) logStatus = do
202 logStatus JobLog { _scst_succeeded = Just 1
203 , _scst_failed = Just 0
204 , _scst_remaining = Just 2
205 , _scst_events = Just []
206 }
207
208 corpusId' <- view node_parent_id <$> getNode phyloId
209
210 let corpusId = fromMaybe (panic "") corpusId'
211
212 phy <- flowPhyloAPI (subConfigAPI2config config) corpusId
213
214 logStatus JobLog { _scst_succeeded = Just 2
215 , _scst_failed = Just 0
216 , _scst_remaining = Just 1
217 , _scst_events = Just []
218 }
219
220 _ <- updateHyperdata phyloId (HyperdataPhylo Nothing (Just phy))
221
222 pure JobLog { _scst_succeeded = Just 3
223 , _scst_failed = Just 0
224 , _scst_remaining = Just 0
225 , _scst_events = Just []
226 }
227
228
229 updateNode _uId tId (UpdateNodeParamsTexts _mode) logStatus = do
230 logStatus JobLog { _scst_succeeded = Just 1
231 , _scst_failed = Just 0
232 , _scst_remaining = Just 2
233 , _scst_events = Just []
234 }
235 corpusId <- view node_parent_id <$> getNode tId
236 lId <- defaultList $ fromMaybe (panic "[G.A.N.Update] updateNode/UpdateNodeParamsTexts: no defaultList") corpusId
237
238 logStatus JobLog { _scst_succeeded = Just 2
239 , _scst_failed = Just 0
240 , _scst_remaining = Just 1
241 , _scst_events = Just []
242 }
243
244 _ <- case corpusId of
245 Just cId -> do
246 _ <- reIndexWith cId lId NgramsTerms (Set.singleton MapTerm)
247 _ <- updateNgramsOccurrences cId (Just lId)
248 _ <- updateContextScore cId (Just lId)
249 _ <- Metrics.updateChart cId (Just lId) NgramsTypes.Docs Nothing
250 -- printDebug "updateContextsScore" (cId, lId, u)
251 pure ()
252 Nothing -> pure ()
253
254 pure JobLog { _scst_succeeded = Just 3
255 , _scst_failed = Just 0
256 , _scst_remaining = Just 0
257 , _scst_events = Just []
258 }
259
260
261
262
263
264 updateNode _uId _nId _p logStatus = do
265 simuLogs logStatus 10
266
267 ------------------------------------------------------------------------
268 -- TODO unPrefix "pn_" FromJSON, ToJSON, ToSchema, adapt frontend.
269 instance FromJSON UpdateNodeParams where
270 parseJSON = genericParseJSON (defaultOptions { sumEncoding = GUA.defaultTaggedObject })
271
272 instance ToJSON UpdateNodeParams where
273 toJSON = genericToJSON (defaultOptions { sumEncoding = GUA.defaultTaggedObject })
274
275 instance ToSchema UpdateNodeParams
276 instance Arbitrary UpdateNodeParams where
277 arbitrary = do
278 l <- UpdateNodeParamsList <$> arbitrary
279 g <- UpdateNodeParamsGraph <$> arbitrary <*> arbitrary <*> arbitrary <*> arbitrary <*> arbitrary <*> arbitrary
280 t <- UpdateNodeParamsTexts <$> arbitrary
281 b <- UpdateNodeParamsBoard <$> arbitrary
282 elements [l,g,t,b]
283
284 instance FromJSON Method
285 instance ToJSON Method
286 instance ToSchema Method
287 instance Arbitrary Method where
288 arbitrary = elements [ minBound .. maxBound ]
289
290 instance FromJSON Granularity
291 instance ToJSON Granularity
292 instance ToSchema Granularity
293 instance Arbitrary Granularity where
294 arbitrary = elements [ minBound .. maxBound ]
295
296 instance FromJSON Charts
297 instance ToJSON Charts
298 instance ToSchema Charts
299 instance Arbitrary Charts where
300 arbitrary = elements [ minBound .. maxBound ]
301
302 ------------------------------------------------------------------------