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3 years ago[FIX] merge dev-phylo
Alexandre Delanoë [Mon, 26 Apr 2021 08:46:46 +0000 (10:46 +0200)]
[FIX] merge dev-phylo

3 years ago[FEAT] Order 1 and 2 implemented.
Alexandre Delanoë [Tue, 30 Mar 2021 09:29:48 +0000 (11:29 +0200)]
[FEAT] Order 1 and 2 implemented.

3 years ago[FIX] clustering, order 2 similarity, ok
Alexandre Delanoë [Mon, 29 Mar 2021 15:58:16 +0000 (17:58 +0200)]
[FIX] clustering, order 2 similarity, ok

3 years ago[FEAT] Distributional Measure Similarity in Graph Flow (WIP)
Alexandre Delanoë [Fri, 26 Mar 2021 10:55:57 +0000 (11:55 +0100)]
[FEAT] Distributional Measure Similarity in Graph Flow (WIP)

3 years agofix package and cabal
qlobbe [Fri, 26 Mar 2021 09:36:59 +0000 (10:36 +0100)]
fix package and cabal

3 years agosave a phylo with cliques
qlobbe [Thu, 25 Mar 2021 15:34:33 +0000 (16:34 +0100)]
save a phylo with cliques

3 years agomerge with dev
qlobbe [Wed, 24 Mar 2021 15:10:01 +0000 (16:10 +0100)]
merge with dev

3 years agogit add step files
qlobbe [Wed, 24 Mar 2021 12:11:11 +0000 (13:11 +0100)]
git add step files

3 years agoMerge branch 'dev' into dev-small-fixes
Przemek Kaminski [Tue, 23 Mar 2021 06:23:31 +0000 (07:23 +0100)]
Merge branch 'dev' into dev-small-fixes

3 years ago[refactoring] small fixes for imports, garg ini
Przemek Kaminski [Tue, 23 Mar 2021 06:15:12 +0000 (07:15 +0100)]
[refactoring] small fixes for imports, garg ini

3 years ago[VERSION] +1 to 0.0.2.8
Alexandre Delanoë [Mon, 22 Mar 2021 18:23:33 +0000 (19:23 +0100)]
[VERSION] +1 to 0.0.2.8

3 years ago[FEAT] new clustering algo by default (Spinglass)
Alexandre Delanoë [Mon, 22 Mar 2021 18:23:13 +0000 (19:23 +0100)]
[FEAT] new clustering algo by default (Spinglass)

3 years agoadd label to sha
qlobbe [Mon, 22 Mar 2021 16:22:45 +0000 (17:22 +0100)]
add label to sha

3 years agoMerge branch 'dev-distributional' of ssh://gitlab.iscpif.fr:20022/gargantext/haskell...
Alexandre Delanoë [Mon, 22 Mar 2021 13:12:25 +0000 (14:12 +0100)]
Merge branch 'dev-distributional' of ssh://gitlab.iscpif.fr:20022/gargantext/haskell-gargantext into dev-merge

3 years ago[FEAT] Implements log distributional function with accelerate (#50).
Guillaume Chérel [Mon, 22 Mar 2021 11:16:40 +0000 (12:16 +0100)]
[FEAT] Implements log distributional function with accelerate (#50).

3 years ago[FIX] warning
Alexandre Delanoë [Thu, 18 Mar 2021 16:07:20 +0000 (17:07 +0100)]
[FIX] warning

3 years ago[FEAT] IGraph partitions complement
Alexandre Delanoë [Thu, 18 Mar 2021 15:53:57 +0000 (16:53 +0100)]
[FEAT] IGraph partitions complement

3 years agofirst commit
qlobbe [Thu, 18 Mar 2021 15:02:16 +0000 (16:02 +0100)]
first commit

3 years ago[CLEAN] sugared funs
Alexandre Delanoë [Thu, 18 Mar 2021 14:45:51 +0000 (15:45 +0100)]
[CLEAN] sugared funs

3 years ago[FUN] with filePath
Alexandre Delanoë [Thu, 18 Mar 2021 12:42:13 +0000 (13:42 +0100)]
[FUN] with filePath

3 years agoadd legacy files
qlobbe [Mon, 15 Mar 2021 11:12:07 +0000 (12:12 +0100)]
add legacy files

3 years agorefactoring 2021, remove old phylo files, keep API
qlobbe [Mon, 15 Mar 2021 11:10:33 +0000 (12:10 +0100)]
refactoring 2021, remove old phylo files, keep API

3 years agoMerge branch 'dev-kawen' of ssh://gitlab.iscpif.fr:20022/gargantext/haskell-gargantex...
Alexandre Delanoë [Tue, 9 Mar 2021 06:45:54 +0000 (07:45 +0100)]
Merge branch 'dev-kawen' of ssh://gitlab.iscpif.fr:20022/gargantext/haskell-gargantext into dev-merge

3 years ago[ngrams] add score update endpoint + sorting
Przemek Kaminski [Tue, 16 Feb 2021 19:45:41 +0000 (20:45 +0100)]
[ngrams] add score update endpoint + sorting

3 years ago[FIX] typo
Alexandre Delanoë [Fri, 26 Feb 2021 07:12:51 +0000 (08:12 +0100)]
[FIX] typo

3 years ago[README/INSTALL] Update image versions
Karen Konou [Fri, 19 Feb 2021 11:45:17 +0000 (12:45 +0100)]
[README/INSTALL] Update image versions

3 years ago[nginx] frames websocket endpoint
Przemek Kaminski [Thu, 18 Feb 2021 11:28:11 +0000 (12:28 +0100)]
[nginx] frames websocket endpoint

3 years ago[DEVOPS] nginx frames config
Alexandre Delanoë [Thu, 18 Feb 2021 11:24:24 +0000 (12:24 +0100)]
[DEVOPS] nginx frames config

3 years ago[DEVOPS] nginx default config
Alexandre Delanoë [Thu, 18 Feb 2021 11:20:07 +0000 (12:20 +0100)]
[DEVOPS] nginx default config

3 years ago[CLEAN]
Alexandre Delanoë [Sun, 7 Feb 2021 15:58:52 +0000 (16:58 +0100)]
[CLEAN]

3 years ago[FIX] removing anonymous function
Alexandre Delanoë [Sun, 7 Feb 2021 15:54:02 +0000 (16:54 +0100)]
[FIX] removing anonymous function

3 years ago[FIX] ViewScore instances
Alexandre Delanoë [Sun, 7 Feb 2021 15:43:35 +0000 (16:43 +0100)]
[FIX] ViewScore instances

3 years ago[FIX] logs folder for logs
Alexandre Delanoë [Fri, 5 Feb 2021 08:09:33 +0000 (09:09 +0100)]
[FIX] logs folder for logs

3 years ago[PARAM] List cut of Candidate Ngrams
Alexandre Delanoë [Thu, 4 Feb 2021 17:44:16 +0000 (18:44 +0100)]
[PARAM] List cut of Candidate Ngrams

3 years ago[FIX] Default Hyperdata Dashboard
Alexandre Delanoë [Thu, 4 Feb 2021 15:25:22 +0000 (16:25 +0100)]
[FIX] Default Hyperdata Dashboard

3 years ago[ADMIN] save logs
Alexandre Delanoë [Thu, 4 Feb 2021 15:24:53 +0000 (16:24 +0100)]
[ADMIN] save logs

3 years agoMerge branch 'dev-merge' into dev
Alexandre Delanoë [Tue, 2 Feb 2021 12:42:06 +0000 (13:42 +0100)]
Merge branch 'dev-merge' into dev

3 years ago[FIX] Louvain parameter
Alexandre Delanoë [Tue, 2 Feb 2021 11:03:42 +0000 (12:03 +0100)]
[FIX] Louvain parameter

3 years ago[VERSION] +1 to 0.0.2.7.1
Alexandre Delanoë [Mon, 1 Feb 2021 19:49:02 +0000 (20:49 +0100)]
[VERSION] +1 to 0.0.2.7.1

3 years ago[FIX] map list to 0
Alexandre Delanoë [Mon, 1 Feb 2021 19:27:14 +0000 (20:27 +0100)]
[FIX] map list to 0

3 years agoMerge branch 'dev' into dev-node-board-add-text-cells
Przemek Kaminski [Mon, 1 Feb 2021 06:19:08 +0000 (07:19 +0100)]
Merge branch 'dev' into dev-node-board-add-text-cells

3 years ago[VERSION] +1 to 0.0.2.7
Alexandre Delanoë [Thu, 28 Jan 2021 15:56:06 +0000 (16:56 +0100)]
[VERSION] +1 to 0.0.2.7

3 years agoMerge branch 'dev-merge' into dev
Alexandre Delanoë [Thu, 28 Jan 2021 14:57:46 +0000 (15:57 +0100)]
Merge branch 'dev-merge' into dev

3 years agoMerge branch 'dev' into dev-node-board-add-text-cells
Przemek Kaminski [Thu, 28 Jan 2021 10:26:02 +0000 (11:26 +0100)]
Merge branch 'dev' into dev-node-board-add-text-cells

3 years agoRevert "[phylo] quality function reparameterized to have high levels for lambda-...
Alexandre Delanoë [Wed, 27 Jan 2021 14:22:50 +0000 (15:22 +0100)]
Revert "[phylo] quality function reparameterized to have high levels for lambda-->1 and low levels for lambda-->0"
Push error

This reverts commit defa83d95af2aac38112fbe71d368397ea4be6e1.

3 years ago[FIX] CNRS org by default
Alexandre Delanoë [Wed, 27 Jan 2021 07:35:10 +0000 (08:35 +0100)]
[FIX] CNRS org by default

3 years ago[FIX] User Layout
Alexandre Delanoë [Tue, 26 Jan 2021 17:00:33 +0000 (18:00 +0100)]
[FIX] User Layout

3 years agoMerge branch 'dev-node-board-add-text-cells' of ssh://gitlab.iscpif.fr:20022/gargante...
Alexandre Delanoë [Tue, 26 Jan 2021 13:18:00 +0000 (14:18 +0100)]
Merge branch 'dev-node-board-add-text-cells' of ssh://gitlab.iscpif.fr:20022/gargantext/haskell-gargantext into dev-merge

3 years ago[dashboard] add missing CorpusField.hs file
Przemek Kaminski [Tue, 26 Jan 2021 13:17:37 +0000 (14:17 +0100)]
[dashboard] add missing CorpusField.hs file

3 years agoMerge branch 'dev-node-board-add-text-cells' of ssh://gitlab.iscpif.fr:20022/gargante...
Alexandre Delanoë [Tue, 26 Jan 2021 13:14:46 +0000 (14:14 +0100)]
Merge branch 'dev-node-board-add-text-cells' of ssh://gitlab.iscpif.fr:20022/gargantext/haskell-gargantext into dev-merge

3 years ago[FIX] Contact Search
Alexandre Delanoë [Mon, 25 Jan 2021 14:00:25 +0000 (15:00 +0100)]
[FIX] Contact Search

3 years ago[dashboard] add 'fields' to hyperdata
Przemek Kaminski [Mon, 25 Jan 2021 11:34:35 +0000 (12:34 +0100)]
[dashboard] add 'fields' to hyperdata

3 years ago[DEMO] read any file to get annuaire
Alexandre Delanoë [Mon, 25 Jan 2021 10:20:02 +0000 (11:20 +0100)]
[DEMO] read any file to get annuaire

3 years ago[DEMO] new format for IMT Annuaire.
Alexandre Delanoë [Mon, 25 Jan 2021 09:49:22 +0000 (10:49 +0100)]
[DEMO] new format for IMT Annuaire.

3 years ago[phylo] working on file naming function. Now OK2 but branch length is still missing
David Chavalarias [Sun, 24 Jan 2021 02:14:25 +0000 (03:14 +0100)]
[phylo] working on file naming function. Now OK2 but branch length is still missing

3 years ago[phylo] working on file naming function. Now OK but branch length is still missing
David Chavalarias [Sat, 23 Jan 2021 14:50:11 +0000 (15:50 +0100)]
[phylo] working on file naming function. Now OK but branch length is still missing

3 years agoMerge branch 'dev-ngrams-table-online' of ssh://gitlab.iscpif.fr:20022/gargantext...
Alexandre Delanoë [Fri, 22 Jan 2021 19:14:26 +0000 (20:14 +0100)]
Merge branch 'dev-ngrams-table-online' of ssh://gitlab.iscpif.fr:20022/gargantext/haskell-gargantext into dev-merge

3 years ago[ngrams] add missing VersionedWithCount functions
Przemek Kaminski [Fri, 22 Jan 2021 18:55:13 +0000 (19:55 +0100)]
[ngrams] add missing VersionedWithCount functions

3 years ago[phylo] changing the name of reclustering parameter in naming function from 'level...
David Chavalarias [Fri, 22 Jan 2021 18:48:42 +0000 (19:48 +0100)]
[phylo] changing the name of reclustering parameter in naming function from 'level' to 'hlev'

3 years ago[phylo] specification of the type of intertemporal matching in the output name
David Chavalarias [Fri, 22 Jan 2021 17:30:09 +0000 (18:30 +0100)]
[phylo] specification of the type of intertemporal matching in the output name

3 years agoparameter change in sensibility to have a [-1 1] range
David Chavalarias [Fri, 22 Jan 2021 14:17:29 +0000 (15:17 +0100)]
parameter change in sensibility to have a [-1 1] range

3 years ago[FIX] html update
Alexandre Delanoë [Fri, 22 Jan 2021 09:23:00 +0000 (10:23 +0100)]
[FIX] html update

3 years ago[FIX] typo
Alexandre Delanoë [Fri, 22 Jan 2021 09:22:43 +0000 (10:22 +0100)]
[FIX] typo

3 years ago[DOC] model for maintenance page on nginx
Alexandre Delanoë [Fri, 22 Jan 2021 09:21:59 +0000 (10:21 +0100)]
[DOC] model for maintenance page on nginx

3 years ago[FIX] normalize username when sharing
Alexandre Delanoë [Thu, 21 Jan 2021 17:21:55 +0000 (18:21 +0100)]
[FIX] normalize username when sharing

3 years agoMerge branch 'dev-phylo' of ssh://gitlab.iscpif.fr:20022/gargantext/haskell-gargantex...
David Chavalarias [Thu, 21 Jan 2021 15:22:08 +0000 (16:22 +0100)]
Merge branch 'dev-phylo' of ssh://gitlab.iscpif.fr:20022/gargantext/haskell-gargantext into dev-phylo

3 years ago[OPTIM] Insert ngrams
Alexandre Delanoë [Thu, 21 Jan 2021 15:20:44 +0000 (16:20 +0100)]
[OPTIM] Insert ngrams

3 years agoworking on a new distance in phylo
David Chavalarias [Thu, 21 Jan 2021 15:20:10 +0000 (16:20 +0100)]
working on a new distance in phylo

3 years ago[OPTIM]
Alexandre Delanoë [Thu, 21 Jan 2021 15:09:28 +0000 (16:09 +0100)]
[OPTIM]

3 years ago[FIX] more strict data
Alexandre Delanoë [Thu, 21 Jan 2021 14:46:43 +0000 (15:46 +0100)]
[FIX] more strict data

3 years ago[DOC] typo
Alexandre Delanoë [Thu, 21 Jan 2021 13:30:12 +0000 (14:30 +0100)]
[DOC] typo

3 years ago[FIX] memory fix
Alexandre Delanoë [Thu, 21 Jan 2021 13:20:39 +0000 (14:20 +0100)]
[FIX] memory fix

3 years ago[VERSION] +1 to 0.0.2.6
Alexandre Delanoë [Thu, 21 Jan 2021 12:26:23 +0000 (13:26 +0100)]
[VERSION] +1 to 0.0.2.6

3 years ago[UPGRADE] main functions
Alexandre Delanoë [Thu, 21 Jan 2021 12:25:48 +0000 (13:25 +0100)]
[UPGRADE] main functions

3 years ago[ngrams API] added VersionedWithCount to ngrams output
Przemek Kaminski [Thu, 21 Jan 2021 11:36:49 +0000 (12:36 +0100)]
[ngrams API] added VersionedWithCount to ngrams output

3 years ago[ngrams API] initial work for getting total ngrams count
Przemek Kaminski [Thu, 21 Jan 2021 11:10:50 +0000 (12:10 +0100)]
[ngrams API] initial work for getting total ngrams count

3 years ago[BIN] upgrade binary for PosTags
Alexandre Delanoë [Thu, 21 Jan 2021 08:12:57 +0000 (09:12 +0100)]
[BIN] upgrade binary for PosTags

3 years ago[UPGRADE] main functions for upgrade (WIP)
Alexandre Delanoë [Wed, 20 Jan 2021 20:25:46 +0000 (21:25 +0100)]
[UPGRADE] main functions for upgrade (WIP)

3 years agofix synchrony
qlobbe [Wed, 20 Jan 2021 17:05:42 +0000 (18:05 +0100)]
fix synchrony

3 years agoMerge branch 'dev-phylo' of ssh://gitlab.iscpif.fr:20022/gargantext/haskell-gargantex...
David Chavalarias [Wed, 20 Jan 2021 15:41:15 +0000 (16:41 +0100)]
Merge branch 'dev-phylo' of ssh://gitlab.iscpif.fr:20022/gargantext/haskell-gargantext into dev-phylo

3 years agoparameter change in the sensibility for WeightedLogSim and WeightedLogJaccard similar...
David Chavalarias [Wed, 20 Jan 2021 15:40:31 +0000 (16:40 +0100)]
parameter change in the sensibility for WeightedLogSim and WeightedLogJaccard similarity measures to have continuous function in 0

3 years agoNew similarity measure for inter-temporal matching added named WeightedLogSim Adapted...
David Chavalarias [Wed, 20 Jan 2021 15:39:10 +0000 (16:39 +0100)]
New similarity measure for inter-temporal matching added named WeightedLogSim Adapted from Wang, X., Cheng, Q., Lu, W., 2014. Analyzing evolution of research topics with NEViewer: a new method based on dynamic co-word networks. Scientometrics 101, 1253–1271. https://doi.org/10.1007/s11192-014-1347-y (log added in the formula + pair comparison)

3 years ago[FIX] clean groups + handling duplicates (TODO inside)
Alexandre Delanoë [Wed, 20 Jan 2021 08:55:09 +0000 (09:55 +0100)]
[FIX] clean groups + handling duplicates (TODO inside)

3 years ago[FIX] lang + algo for select + fix warnings
Alexandre Delanoë [Wed, 20 Jan 2021 08:19:36 +0000 (09:19 +0100)]
[FIX] lang + algo for select + fix warnings

3 years agofilter the clique by neighbours
qlobbe [Tue, 19 Jan 2021 17:36:19 +0000 (18:36 +0100)]
filter the clique by neighbours

3 years agoMerge branch 'dev' into dev-ngrams-groups
Alexandre Delanoë [Tue, 19 Jan 2021 16:32:53 +0000 (17:32 +0100)]
Merge branch 'dev' into dev-ngrams-groups

3 years agoMerge branch 'dev' of ssh://gitlab.iscpif.fr:20022/gargantext/haskell-gargantext...
Alexandre Delanoë [Tue, 19 Jan 2021 16:26:25 +0000 (17:26 +0100)]
Merge branch 'dev' of ssh://gitlab.iscpif.fr:20022/gargantext/haskell-gargantext into dev-ngrams-groups

3 years ago[TEST Q] ok (needs some refact still)
Alexandre Delanoë [Tue, 19 Jan 2021 16:25:19 +0000 (17:25 +0100)]
[TEST Q] ok (needs some refact still)

3 years ago[FIX] insertion is ok now.
Alexandre Delanoë [Tue, 19 Jan 2021 15:59:31 +0000 (16:59 +0100)]
[FIX] insertion is ok now.

3 years ago[ini] strip trailing slash from ini urls
Przemek Kaminski [Tue, 19 Jan 2021 15:58:56 +0000 (16:58 +0100)]
[ini] strip trailing slash from ini urls

3 years ago[FEAT] group ngrams, connected (testing now)
Alexandre Delanoë [Tue, 19 Jan 2021 15:00:12 +0000 (16:00 +0100)]
[FEAT] group ngrams, connected (testing now)

3 years ago[TYPES] group type for lems
Alexandre Delanoë [Mon, 18 Jan 2021 16:16:38 +0000 (17:16 +0100)]
[TYPES] group type for lems

3 years ago[FEAT] SQL fun to get lems
Alexandre Delanoë [Mon, 18 Jan 2021 15:06:44 +0000 (16:06 +0100)]
[FEAT] SQL fun to get lems

3 years ago[FIX] ngrams + ngramsPosTag insert
Alexandre Delanoë [Mon, 18 Jan 2021 14:17:23 +0000 (15:17 +0100)]
[FIX] ngrams + ngramsPosTag insert

3 years agofix ancestors on a single branch
qlobbe [Mon, 18 Jan 2021 12:09:28 +0000 (13:09 +0100)]
fix ancestors on a single branch

3 years agoin clustering synchronique change to 1 / sensibility
qlobbe [Mon, 18 Jan 2021 11:11:48 +0000 (12:11 +0100)]
in clustering synchronique change to 1 / sensibility

3 years ago[phylo] Inversion of level range in re-parameterization
David Chavalarias [Mon, 18 Jan 2021 10:04:29 +0000 (11:04 +0100)]
[phylo] Inversion of level range in re-parameterization

3 years ago[phylo] quality function reparameterized to have high levels for lambda-->1 and low...
Gargamelle [Sun, 17 Jan 2021 10:44:13 +0000 (11:44 +0100)]
[phylo] quality function reparameterized to have high levels for lambda-->1 and low levels for lambda-->0

3 years ago[WIP] needs improved type
Alexandre Delanoë [Fri, 15 Jan 2021 21:57:04 +0000 (22:57 +0100)]
[WIP] needs improved type

3 years agoMerge branch 'dev' into dev-ngrams-groups
Alexandre Delanoë [Thu, 14 Jan 2021 15:26:31 +0000 (16:26 +0100)]
Merge branch 'dev' into dev-ngrams-groups