tests/Phylomemy/TemporalMatchingSpec/dotMaximalSpanningForest/docs=docs0.minSupp=1.minSize=2.lambda=0.30.scale=1.golden

   1 /*
   2 fromList
   3     \e[0;95;1m[\e[0m
   4         \e[0;96;1m(\e[0m Pos \e[0;92;1m1\e[0m
   5         \e[0;96;1m,\e[0m
   6             \e[0;93;1m[\e[0m \e[0;92;1m1\e[0m
   7             \e[0;93;1m,\e[0m \e[0;92;1m2\e[0m
   8             \e[0;93;1m,\e[0m \e[0;92;1m5\e[0m
   9             \e[0;93;1m]\e[0m
  10         \e[0;96;1m)\e[0m
  11     \e[0;95;1m,\e[0m
  12         \e[0;96;1m(\e[0m Pos \e[0;92;1m2\e[0m
  13         \e[0;96;1m,\e[0m
  14             \e[0;93;1m[\e[0m \e[0;92;1m1\e[0m
  15             \e[0;93;1m,\e[0m \e[0;92;1m3\e[0m
  16             \e[0;93;1m,\e[0m \e[0;92;1m5\e[0m
  17             \e[0;93;1m]\e[0m
  18         \e[0;96;1m)\e[0m
  19     \e[0;95;1m,\e[0m
  20         \e[0;96;1m(\e[0m Pos \e[0;92;1m3\e[0m
  21         \e[0;96;1m,\e[0m
  22             \e[0;93;1m[\e[0m \e[0;92;1m3\e[0m
  23             \e[0;93;1m,\e[0m \e[0;92;1m4\e[0m
  24             \e[0;93;1m]\e[0m
  25         \e[0;96;1m)\e[0m
  26     \e[0;95;1m,\e[0m
  27         \e[0;96;1m(\e[0m Pos \e[0;92;1m4\e[0m
  28         \e[0;96;1m,\e[0m
  29             \e[0;93;1m[\e[0m \e[0;92;1m1\e[0m
  30             \e[0;93;1m,\e[0m \e[0;92;1m5\e[0m
  31             \e[0;93;1m]\e[0m
  32         \e[0;96;1m)\e[0m
  33     \e[0;95;1m,\e[0m
  34         \e[0;96;1m(\e[0m Pos \e[0;92;1m5\e[0m
  35         \e[0;96;1m,\e[0m
  36             \e[0;93;1m[\e[0m \e[0;92;1m1\e[0m
  37             \e[0;93;1m,\e[0m \e[0;92;1m3\e[0m
  38             \e[0;93;1m,\e[0m \e[0;92;1m4\e[0m
  39             \e[0;93;1m,\e[0m \e[0;92;1m6\e[0m
  40             \e[0;93;1m]\e[0m
  41         \e[0;96;1m)\e[0m
  42     \e[0;95;1m,\e[0m
  43         \e[0;96;1m(\e[0m Pos \e[0;92;1m6\e[0m
  44         \e[0;96;1m,\e[0m
  45             \e[0;93;1m[\e[0m \e[0;92;1m2\e[0m
  46             \e[0;93;1m,\e[0m \e[0;92;1m5\e[0m
  47             \e[0;93;1m,\e[0m \e[0;92;1m7\e[0m
  48             \e[0;93;1m,\e[0m \e[0;92;1m8\e[0m
  49             \e[0;93;1m]\e[0m
  50         \e[0;96;1m)\e[0m
  51     \e[0;95;1m]\e[0m
  52 */
  53 digraph g
  54 {
  55   splines="ortho"
  56   subgraph cluster_r1
  57   {
  58     /*
  59     Create a node for the range r1
  60     */
  61     r1[shape=box,label="1",color=gray,style=filled,fillcolor=gray]
  62     color=gray
  63     {
  64       rank=same
  65       /*
  66       Create the cluster nodes within the range r1
  67       */
  68       r1t1c1[label="a & d & e
  69
  70 T001
  71 S1",style=filled,colorscheme=ylorrd9,shape=box]
  72       r1t2c1[label="e & f & g
  73
  74 T002
  75 S1",style=filled,colorscheme=ylorrd9,shape=box]
  76       r1t5c1[label="a & b & c
  77
  78 T005
  79 S1",style=filled,colorscheme=ylorrd9,shape=box]
  80       /*
  81       Horizontally align the cluster nodes within the same range
  82       */
  83       r1 -> r1t1c1[style=invis]
  84       r1t1c1 -> r1t2c1[weight=10,style=invis]
  85       r1t2c1 -> r1t5c1[weight=10,style=invis]
  86     }
  87   }
  88   subgraph cluster_r2
  89   {
  90     /*
  91     Create a node for the range r2
  92     */
  93     r2[shape=box,label="2",color=gray,style=filled,fillcolor=gray]
  94     color=gray
  95     {
  96       rank=same
  97       /*
  98       Create the cluster nodes within the range r2
  99       */
 100       r2t1c1[label="a & d
 101
 102 T001
 103 S1",style=filled,colorscheme=ylorrd9,shape=box]
 104       r2t3c1[label="d & f
 105
 106 T003
 107 S1",style=filled,colorscheme=ylorrd9,shape=box]
 108       r2t5c1[label="a & b
 109
 110 T005
 111 S1",style=filled,colorscheme=ylorrd9,shape=box]
 112       /*
 113       Horizontally align the cluster nodes within the same range
 114       */
 115       r2 -> r2t1c1[style=invis]
 116       r2t1c1 -> r2t3c1[weight=10,style=invis]
 117       r2t3c1 -> r2t5c1[weight=10,style=invis]
 118     }
 119   }
 120   subgraph cluster_r3
 121   {
 122     /*
 123     Create a node for the range r3
 124     */
 125     r3[shape=box,label="3",color=gray,style=filled,fillcolor=gray]
 126     color=gray
 127     {
 128       rank=same
 129       /*
 130       Create the cluster nodes within the range r3
 131       */
 132       r3t3c1[label="d & f
 133
 134 T003
 135 S1",style=filled,colorscheme=ylorrd9,shape=box]
 136       r3t4c1[label="a & f & g
 137
 138 T004
 139 S1",style=filled,colorscheme=ylorrd9,shape=box]
 140       /*
 141       Horizontally align the cluster nodes within the same range
 142       */
 143       r3 -> r3t3c1[style=invis]
 144       r3t3c1 -> r3t4c1[weight=10,style=invis]
 145     }
 146   }
 147   subgraph cluster_r4
 148   {
 149     /*
 150     Create a node for the range r4
 151     */
 152     r4[shape=box,label="4",color=gray,style=filled,fillcolor=gray]
 153     color=gray
 154     {
 155       rank=same
 156       /*
 157       Create the cluster nodes within the range r4
 158       */
 159       r4t1c1[label="a & d & e
 160
 161 T001
 162 S1",style=filled,colorscheme=ylorrd9,shape=box]
 163       r4t5c1[label="a & b & c
 164 b & c
 165 b & c & e
 166
 167 T005
 168 S1",style=filled,colorscheme=ylorrd9,shape=box]
 169       /*
 170       Horizontally align the cluster nodes within the same range
 171       */
 172       r4 -> r4t1c1[style=invis]
 173       r4t1c1 -> r4t5c1[weight=10,style=invis]
 174     }
 175   }
 176   subgraph cluster_r5
 177   {
 178     /*
 179     Create a node for the range r5
 180     */
 181     r5[shape=box,label="5",color=gray,style=filled,fillcolor=gray]
 182     color=gray
 183     {
 184       rank=same
 185       /*
 186       Create the cluster nodes within the range r5
 187       */
 188       r5t1c1[label="a & c & d
 189
 190 T001
 191 S1",style=filled,colorscheme=ylorrd9,shape=box]
 192       r5t3c1[label="d & f & g
 193
 194 T003
 195 S1",style=filled,colorscheme=ylorrd9,shape=box]
 196       r5t4c1[label="a & f
 197
 198 T004
 199 S1",style=filled,colorscheme=ylorrd9,shape=box]
 200       r5t6c1[label="b & f
 201
 202 T006
 203 S1",style=filled,colorscheme=ylorrd9,shape=box]
 204       /*
 205       Horizontally align the cluster nodes within the same range
 206       */
 207       r5 -> r5t1c1[style=invis]
 208       r5t1c1 -> r5t3c1[weight=10,style=invis]
 209       r5t3c1 -> r5t4c1[weight=10,style=invis]
 210       r5t4c1 -> r5t6c1[weight=10,style=invis]
 211     }
 212   }
 213   subgraph cluster_r6
 214   {
 215     /*
 216     Create a node for the range r6
 217     */
 218     r6[shape=box,label="6",color=gray,style=filled,fillcolor=gray]
 219     color=gray
 220     {
 221       rank=same
 222       /*
 223       Create the cluster nodes within the range r6
 224       */
 225       r6t2c1[label="e & g
 226
 227 T002
 228 S1",style=filled,colorscheme=ylorrd9,shape=box]
 229       r6t5c1[label="a & b & c
 230 b & c
 231 b & c & g
 232
 233 T005
 234 S1",style=filled,colorscheme=ylorrd9,shape=box]
 235       r6t7c1[label="c & d & g
 236
 237 T007
 238 S1",style=filled,colorscheme=ylorrd9,shape=box]
 239       r6t8c1[label="c & g
 240
 241 T008
 242 S1",style=filled,colorscheme=ylorrd9,shape=box]
 243       /*
 244       Horizontally align the cluster nodes within the same range
 245       */
 246       r6 -> r6t2c1[style=invis]
 247       r6t2c1 -> r6t5c1[weight=10,style=invis]
 248       r6t5c1 -> r6t7c1[weight=10,style=invis]
 249       r6t7c1 -> r6t8c1[weight=10,style=invis]
 250     }
 251   }
 252   /*
 253   Create the edges of the MST 1
 254   */
 255   r1t1c1 -> r5t1c1[constraint=false,color=6,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 256   r1t1c1 -> r2t1c1[constraint=false,color=6,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 257   r1t1c1 -> r4t1c1[constraint=false,color=0,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 258   /*
 259   Create the edges of the MST 2
 260   */
 261   r1t2c1 -> r6t2c1[constraint=false,color=6,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 262   /*
 263   Create the edges of the MST 3
 264   */
 265   r2t3c1 -> r5t3c1[constraint=false,color=6,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 266   r2t3c1 -> r3t3c1[constraint=false,color=0,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 267   /*
 268   Create the edges of the MST 4
 269   */
 270   r3t4c1 -> r5t4c1[constraint=false,color=6,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 271   /*
 272   Create the edges of the MST 5
 273   */
 274   r4t5c1 -> r1t5c1[constraint=false,color=6,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 275   r1t5c1 -> r6t5c1[constraint=false,color=6,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 276   r1t5c1 -> r4t5c1[constraint=false,color=6,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 277   r4t5c1 -> r6t5c1[constraint=false,color=0,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 278   r1t5c1 -> r2t5c1[constraint=false,color=6,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 279   r1t5c1 -> r6t5c1[constraint=false,color=0,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 280   r1t5c1 -> r4t5c1[constraint=false,color=0,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 281   /*
 282   Create the edges of the MST 6
 283   */
 284   /*
 285   Create the edges of the MST 7
 286   */
 287   /*
 288   Create the edges of the MST 8
 289   */
 290   /*
 291   Vertically align range nodes
 292   */
 293   r1 -> r2 -> r3 -> r4 -> r5 -> r6[weight=10,style=invis]
 294 }