tests/Phylomemy/TemporalMatchingSpec/dotMaximalSpanningForest/docs=docs0.minSupp=1.minSize=2.lambda=0.30.scale=2.golden

   1 /*
   2 fromList
   3     \e[0;95;1m[\e[0m
   4         \e[0;96;1m(\e[0m Pos \e[0;92;1m1\e[0m
   5         \e[0;96;1m,\e[0m
   6             \e[0;93;1m[\e[0m \e[0;92;1m1\e[0m
   7             \e[0;93;1m,\e[0m \e[0;92;1m2\e[0m
   8             \e[0;93;1m,\e[0m \e[0;92;1m5\e[0m
   9             \e[0;93;1m]\e[0m
  10         \e[0;96;1m)\e[0m
  11     \e[0;95;1m,\e[0m
  12         \e[0;96;1m(\e[0m Pos \e[0;92;1m2\e[0m
  13         \e[0;96;1m,\e[0m
  14             \e[0;93;1m[\e[0m \e[0;92;1m1\e[0m
  15             \e[0;93;1m,\e[0m \e[0;92;1m3\e[0m
  16             \e[0;93;1m,\e[0m \e[0;92;1m5\e[0m
  17             \e[0;93;1m]\e[0m
  18         \e[0;96;1m)\e[0m
  19     \e[0;95;1m,\e[0m
  20         \e[0;96;1m(\e[0m Pos \e[0;92;1m3\e[0m
  21         \e[0;96;1m,\e[0m
  22             \e[0;93;1m[\e[0m \e[0;92;1m3\e[0m
  23             \e[0;93;1m,\e[0m \e[0;92;1m4\e[0m
  24             \e[0;93;1m]\e[0m
  25         \e[0;96;1m)\e[0m
  26     \e[0;95;1m,\e[0m
  27         \e[0;96;1m(\e[0m Pos \e[0;92;1m4\e[0m
  28         \e[0;96;1m,\e[0m
  29             \e[0;93;1m[\e[0m \e[0;92;1m1\e[0m
  30             \e[0;93;1m,\e[0m \e[0;92;1m5\e[0m
  31             \e[0;93;1m]\e[0m
  32         \e[0;96;1m)\e[0m
  33     \e[0;95;1m,\e[0m
  34         \e[0;96;1m(\e[0m Pos \e[0;92;1m5\e[0m
  35         \e[0;96;1m,\e[0m
  36             \e[0;93;1m[\e[0m \e[0;92;1m1\e[0m
  37             \e[0;93;1m,\e[0m \e[0;92;1m3\e[0m
  38             \e[0;93;1m,\e[0m \e[0;92;1m4\e[0m
  39             \e[0;93;1m,\e[0m \e[0;92;1m6\e[0m
  40             \e[0;93;1m]\e[0m
  41         \e[0;96;1m)\e[0m
  42     \e[0;95;1m,\e[0m
  43         \e[0;96;1m(\e[0m Pos \e[0;92;1m6\e[0m
  44         \e[0;96;1m,\e[0m
  45             \e[0;93;1m[\e[0m \e[0;92;1m2\e[0m
  46             \e[0;93;1m,\e[0m \e[0;92;1m5\e[0m
  47             \e[0;93;1m,\e[0m \e[0;92;1m7\e[0m
  48             \e[0;93;1m,\e[0m \e[0;92;1m8\e[0m
  49             \e[0;93;1m]\e[0m
  50         \e[0;96;1m)\e[0m
  51     \e[0;95;1m]\e[0m
  52 */
  53 digraph g
  54 {
  55   splines="ortho"
  56   subgraph cluster_r1
  57   {
  58     /*
  59     Create a node for the range r1
  60     */
  61     r1[shape=box,label="1",color=gray,style=filled,fillcolor=gray]
  62     color=gray
  63     {
  64       rank=same
  65       /*
  66       Create the cluster nodes within the range r1
  67       */
  68       r1t1c1[label="a & d & e
  69
  70 T001
  71 S2",style=filled,colorscheme=ylorrd9,shape=box]
  72       r1t2c1[label="e & f & g
  73
  74 T002
  75 S2",style=filled,colorscheme=ylorrd9,shape=box]
  76       r1t5c2[label="a & b & c
  77
  78 T005
  79 S2",style=filled,colorscheme=ylorrd9,shape=box]
  80       /*
  81       Horizontally align the cluster nodes within the same range
  82       */
  83       r1 -> r1t1c1[style=invis]
  84       r1t1c1 -> r1t2c1[weight=10,style=invis]
  85       r1t2c1 -> r1t5c2[weight=10,style=invis]
  86     }
  87   }
  88   subgraph cluster_r2
  89   {
  90     /*
  91     Create a node for the range r2
  92     */
  93     r2[shape=box,label="2",color=gray,style=filled,fillcolor=gray]
  94     color=gray
  95     {
  96       rank=same
  97       /*
  98       Create the cluster nodes within the range r2
  99       */
 100       r2t1c3[label="a & d
 101
 102 T001
 103 S2",style=filled,colorscheme=ylorrd9,shape=box]
 104       r2t3c1[label="d & f
 105
 106 T003
 107 S2",style=filled,colorscheme=ylorrd9,shape=box]
 108       r2t5c5[label="a & b
 109
 110 T005
 111 S2",style=filled,colorscheme=ylorrd9,shape=box]
 112       /*
 113       Horizontally align the cluster nodes within the same range
 114       */
 115       r2 -> r2t1c3[style=invis]
 116       r2t1c3 -> r2t3c1[weight=10,style=invis]
 117       r2t3c1 -> r2t5c5[weight=10,style=invis]
 118     }
 119   }
 120   subgraph cluster_r3
 121   {
 122     /*
 123     Create a node for the range r3
 124     */
 125     r3[shape=box,label="3",color=gray,style=filled,fillcolor=gray]
 126     color=gray
 127     {
 128       rank=same
 129       /*
 130       Create the cluster nodes within the range r3
 131       */
 132       r3t3c1[label="d & f
 133
 134 T003
 135 S2",style=filled,colorscheme=ylorrd9,shape=box]
 136       r3t4c1[label="a & f & g
 137
 138 T004
 139 S2",style=filled,colorscheme=ylorrd9,shape=box]
 140       /*
 141       Horizontally align the cluster nodes within the same range
 142       */
 143       r3 -> r3t3c1[style=invis]
 144       r3t3c1 -> r3t4c1[weight=10,style=invis]
 145     }
 146   }
 147   subgraph cluster_r4
 148   {
 149     /*
 150     Create a node for the range r4
 151     */
 152     r4[shape=box,label="4",color=gray,style=filled,fillcolor=gray]
 153     color=gray
 154     {
 155       rank=same
 156       /*
 157       Create the cluster nodes within the range r4
 158       */
 159       r4t1c1[label="a & d & e
 160
 161 T001
 162 S2",style=filled,colorscheme=ylorrd9,shape=box]
 163       r4t5c1[label="b & c & e
 164
 165 T005
 166 S2",style=filled,colorscheme=ylorrd9,shape=box]
 167       r4t5c2[label="a & b & c
 168
 169 T005
 170 S2",style=filled,colorscheme=ylorrd9,shape=box]
 171       r4t5c4[label="b & c
 172
 173 T005
 174 S2",style=filled,colorscheme=ylorrd9,shape=box]
 175       /*
 176       Horizontally align the cluster nodes within the same range
 177       */
 178       r4 -> r4t1c1[style=invis]
 179       r4t1c1 -> r4t5c1[weight=10,style=invis]
 180       r4t5c1 -> r4t5c2[weight=10,style=invis]
 181       r4t5c2 -> r4t5c4[weight=10,style=invis]
 182     }
 183   }
 184   subgraph cluster_r5
 185   {
 186     /*
 187     Create a node for the range r5
 188     */
 189     r5[shape=box,label="5",color=gray,style=filled,fillcolor=gray]
 190     color=gray
 191     {
 192       rank=same
 193       /*
 194       Create the cluster nodes within the range r5
 195       */
 196       r5t1c2[label="a & c & d
 197
 198 T001
 199 S2",style=filled,colorscheme=ylorrd9,shape=box]
 200       r5t3c2[label="d & f & g
 201
 202 T003
 203 S2",style=filled,colorscheme=ylorrd9,shape=box]
 204       r5t4c2[label="a & f
 205
 206 T004
 207 S2",style=filled,colorscheme=ylorrd9,shape=box]
 208       r5t6c1[label="b & f
 209
 210 T006
 211 S2",style=filled,colorscheme=ylorrd9,shape=box]
 212       /*
 213       Horizontally align the cluster nodes within the same range
 214       */
 215       r5 -> r5t1c2[style=invis]
 216       r5t1c2 -> r5t3c2[weight=10,style=invis]
 217       r5t3c2 -> r5t4c2[weight=10,style=invis]
 218       r5t4c2 -> r5t6c1[weight=10,style=invis]
 219     }
 220   }
 221   subgraph cluster_r6
 222   {
 223     /*
 224     Create a node for the range r6
 225     */
 226     r6[shape=box,label="6",color=gray,style=filled,fillcolor=gray]
 227     color=gray
 228     {
 229       rank=same
 230       /*
 231       Create the cluster nodes within the range r6
 232       */
 233       r6t2c2[label="e & g
 234
 235 T002
 236 S2",style=filled,colorscheme=ylorrd9,shape=box]
 237       r6t5c2[label="a & b & c
 238
 239 T005
 240 S2",style=filled,colorscheme=ylorrd9,shape=box]
 241       r6t5c3[label="b & c & g
 242
 243 T005
 244 S2",style=filled,colorscheme=ylorrd9,shape=box]
 245       r6t5c4[label="b & c
 246
 247 T005
 248 S2",style=filled,colorscheme=ylorrd9,shape=box]
 249       r6t7c1[label="c & d & g
 250
 251 T007
 252 S2",style=filled,colorscheme=ylorrd9,shape=box]
 253       r6t8c1[label="c & g
 254
 255 T008
 256 S2",style=filled,colorscheme=ylorrd9,shape=box]
 257       /*
 258       Horizontally align the cluster nodes within the same range
 259       */
 260       r6 -> r6t2c2[style=invis]
 261       r6t2c2 -> r6t5c2[weight=10,style=invis]
 262       r6t5c2 -> r6t5c3[weight=10,style=invis]
 263       r6t5c3 -> r6t5c4[weight=10,style=invis]
 264       r6t5c4 -> r6t7c1[weight=10,style=invis]
 265       r6t7c1 -> r6t8c1[weight=10,style=invis]
 266     }
 267   }
 268   /*
 269   Create the edges of the MST 1
 270   */
 271   r1t1c1 -> r5t1c2[constraint=false,color=6,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 272   r1t1c1 -> r2t1c3[constraint=false,color=6,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 273   r1t1c1 -> r4t1c1[constraint=false,color=0,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 274   /*
 275   Create the edges of the MST 2
 276   */
 277   r1t2c1 -> r6t2c2[constraint=false,color=6,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 278   /*
 279   Create the edges of the MST 3
 280   */
 281   r2t3c1 -> r5t3c2[constraint=false,color=6,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 282   r2t3c1 -> r3t3c1[constraint=false,color=0,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 283   /*
 284   Create the edges of the MST 4
 285   */
 286   r3t4c1 -> r5t4c2[constraint=false,color=6,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 287   /*
 288   Create the edges of the MST 5
 289   */
 290   r4t5c1 -> r1t5c2[constraint=false,color=6,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 291   r1t5c2 -> r6t5c3[constraint=false,color=6,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 292   r1t5c2 -> r4t5c4[constraint=false,color=6,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 293   r4t5c4 -> r6t5c4[constraint=false,color=0,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 294   r1t5c2 -> r2t5c5[constraint=false,color=6,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 295   r1t5c2 -> r6t5c2[constraint=false,color=0,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 296   r1t5c2 -> r4t5c2[constraint=false,color=0,colorscheme=ylorrd9,fontcolor=blue,dir=both,arrowhead=dot,arrowtail=dot]
 297   /*
 298   Create the edges of the MST 6
 299   */
 300   /*
 301   Create the edges of the MST 7
 302   */
 303   /*
 304   Create the edges of the MST 8
 305   */
 306   /*
 307   Vertically align range nodes
 308   */
 309   r1 -> r2 -> r3 -> r4 -> r5 -> r6[weight=10,style=invis]
 310 }